Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0379 ATGGAGAGAGCAACATTGCTCCTCAAACTATTCCCTCTAATTCTATCTCTTCTAAATGCTCTTCTTACCTCCTCCTTAGCTGCTTCAGAAGATAAACTGTTAGATGCATCCAAGTTGGAGATGTTTGTGGATGAGCTTCCTCATATGCCCAAAATCCTTGGCTACAAGGTTTCCAATGGAGTCCCCATATCAAAGTCTCTCAAGATTAGCATGTTCAAGAAGAAATGGAAATTCCACAAGGATCTCCTTCCAACAAGGGTTTATGCTTATGGATTAACCAAACGCACCGCATCAGTACCTGGTCCCACCATCGAGGCCCTCCACGGAGTTGGGACCCACGTGAGGTGGCAAAATAAACTCCCCCCACACCACATCCTCCCGTGGGATCCATCTATCCCCGTCGCCTCACCCAACACCTCCGGCGGCATCCCCACGGTGGTTCACCTCCACGGCGGGATCCACGAGCCCGAGAGCGACGGAAACGCAAATTCATGGTTCACTGCACAGTTCAAAAAGAGAGGACCCACCTGGACCAAGAAGACCTATCACTACCCAAACAACCAACAACCAGGAAATCTATGGTACCATGACCATGCCATGGGGTTGACCCGGGTCAACCTCCTCGCTGGCTTAATAGGAGCCTACATCATCCGCCACCCTTCCATCGAGTCCCCGTTGGGATTACCCATAGGCGACGAGCTAGATCGACCGTTGGTCTTGTTCGATCGTAGCTTCCGGAGCGACGGTTCAATCTACATGAACTCCACCGGAAACAACCCTTCCATACACCCGCAGTGGCAGCCAGAGTATTTTGGCGACGCCATCATCGTCAACGGCAAAGCCTGGCCACATCTCACCGTACGTCGTCGGAGGTACAGATTCCGCATCATCAACGCCAGCAACGCGAGATTCTTCAGACTCTTCTTCACCAACGGTTTGAGATTCACACATGTGGCAGCTGATTCTGCTTACATCGAGAAACCGATCACAACCAAGAAAACCTTAATGGGGCCATCTGAGATCACTGACGTTATTGTTGACTTTTCAGAGTCAAAGAGCAACGTTGCTATTCTAGCCAACGATGCAAAGTATCCTTACCCTGACGGTGACTCGGTTGATGAAGCTACCAGCAAGGTTATGAAATTCAACATCTTACCCGATAAGCAAGTTGACATGTCACGGATCCCAAAAATGTTATTGAATTACCCTATTGCTGGTTTATCAGGCGTGTCGCACACACGGTACATTGCTATGTACGAGTACACCACCGACAAAGGTGAGCCAACTCACTTGTACATGAATGGGAAATCGTACGACGCGCCGGTTACTGAGACCCCGAAGGAGGGGTCCACTGAGGTGTGGAATGTGATAAACTTGACGGGCGATAATCACCCGCTTCACGTTCATTTGGGTTTGTTCAAGGTGTTGGATCAGACGAAGGTGGTTAATTTGGATGAGTTTAAGGATTGCATGGTGAAAATCAACGATGCGATGAAGTGCCACGTGGGTGAGTATGCACGAGGGGAGAAGGTGGAGGTGCCAGGTCATGAGAAAGGGTGGAAGAATGTGTTCAAGATGAGACCGGGGTTCGTGACGAAGATTGTGGTGAGGTTTGGTTACATACATACCAATGCATCGTATGAGTTTGATGCAACCGCAGAGCCTGGCTATGTGTATCATTGTCATGTATTGGACCATGAAGACAATGTCATGATGAGACCCTTCAAAATCATCAAGTGA 1740 0.4914 MERATLLLKLFPLILSLLNALLTSSLAASEDKLLDASKLEMFVDELPHMPKILGYKVSNGVPISKSLKISMFKKKWKFHKDLLPTRVYAYGLTKRTASVPGPTIEALHGVGTHVRWQNKLPPHHILPWDPSIPVASPNTSGGIPTVVHLHGGIHEPESDGNANSWFTAQFKKRGPTWTKKTYHYPNNQQPGNLWYHDHAMGLTRVNLLAGLIGAYIIRHPSIESPLGLPIGDELDRPLVLFDRSFRSDGSIYMNSTGNNPSIHPQWQPEYFGDAIIVNGKAWPHLTVRRRRYRFRIINASNARFFRLFFTNGLRFTHVAADSAYIEKPITTKKTLMGPSEITDVIVDFSESKSNVAILANDAKYPYPDGDSVDEATSKVMKFNILPDKQVDMSRIPKMLLNYPIAGLSGVSHTRYIAMYEYTTDKGEPTHLYMNGKSYDAPVTETPKEGSTEVWNVINLTGDNHPLHVHLGLFKVLDQTKVVNLDEFKDCMVKINDAMKCHVGEYARGEKVEVPGHEKGWKNVFKMRPGFVTKIVVRFGYIHTNASYEFDATAEPGYVYHCHVLDHEDNVMMRPFKIIK* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0379 579 SUPERFAMILY Cupredoxins 63 222 IPR008972 -
Lja5g0379 579 Gene3D - 403 579 IPR008972 -
Lja5g0379 579 PANTHER MULTICOPPER OXIDASE LPR1 20 575 - -
Lja5g0379 579 CDD CuRO_1_BOD_CotA_like 69 220 - -
Lja5g0379 579 Gene3D - 221 400 IPR008972 -
Lja5g0379 579 SUPERFAMILY Cupredoxins 403 577 IPR008972 -
Lja5g0379 579 Pfam Multicopper oxidase 429 576 IPR011706 GO:0005507|GO:0016491
Lja5g0379 579 Pfam Multicopper oxidase 273 360 IPR001117 -
Lja5g0379 579 SUPERFAMILY Cupredoxins 232 351 IPR008972 -
Lja5g0379 579 Gene3D - 37 217 IPR008972 -
Lja5g0379 579 CDD CuRO_2_CotA_like 235 384 - -
Lja5g0379 579 CDD CuRO_3_CotA_like 411 577 - -
Lja5g0379 579 Pfam Multicopper oxidase 143 220 IPR011707 GO:0005507
Lja5g0379 579 PANTHER MULTI-COPPER OXIDASE 20 575 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0379 Lja-Chr5 3361504 3364959 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0379 5 3361504 3364959 Lja5g0379 5 3361504 3364959 ECH