Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0375 ATGACTAAAGAAGAAGACTTTAAGCTCCTTAAAATCCAGACTTGTGTTCTCAAAGTGAACATTCACTGTGATGGTTGTAAGCAGAAAGTGAAGAAACTCCTTCAGAGAATTGAAGGTGTTTACCAAGTTCAAATAGATGCAGAACAGCAGAAAGTAACAGTTTCAGGTAGTGTGGACTCTGCAACTTTGATCAAGAAATTGAACAGATCTGGTAAACATGCTGAGCTCTGGTCTCAGAAGGCTAATCAGAACCAAAAGCAGAAGAACAACAACAATATCAACAATGTGAAAGATGACAAGAACAATAAAGGGCAAAAACAAGGACTAGTGAAGGGTCTTGAGGCAGCATTCAAAAACCACCAGCAGCAGCAGCAGAAGTTTCCTGCTTTCAGTTCTGAAGAGGATGATGAATACTATGACTATGATGATGAGGATGATGATGATGAAGAGTTGAGGTTCATCAGGGAGAAAGCAAATCAGCTTCAATTGCTGAGGCAGCAGCAGCAAGCAGTTGTTGATGCTAACAACAATGTGAAGAAGGCAATTTCTGCAGCTTCCAACAATGGTCATAATAAGATGAACAATGCTGCTGGCAAGAAAGGAGGCCAAAATCAGAACATGGGAGGAATGAAGGAGAGCAATGTGGGGTTTGATCAGAAAACCATGGCAGCTCTGAAACTGAACAATGCTCATCTGGGTGGTGGTGAAAGCCTCAATCTTGGAGAAGCTAAAAGGGCCAATGACATTGGTGCTATGATGAATTTAGCTGGGTTTAATGGTGGTAATGCTGGCAATGCAACTGTTCTTGGGGGAAATTCCAATGGAATGGGAGGGTTTCCTGTTCAGTCCAACAACATGTTTCAGGGAAATTCCCCTGCTGCTGTTCCAAATGGTGGTTATGCACCATCTATGCTAATGAACATGAATGGGTTCAATAATCATCAATCACCAATGATGAACATGAACATGATGCAGACTAGGCATGCTATGCAGCAACAACCTCAGATGATGTTTCACAGGTCCCCTGTCATTCCTCCTAACACTGGCTATTACTTCAATCACAATAACTATAACCCTGCTGCAAATTACTCGTATTATGCCTCCTTGCCTAGTTACCCTGGAGGAGATTATGATCATGATCATCACTCGGCAGCTCACATGTTCAGTGATGACAACACTACCAGCAGCTGTTCAGTGATGTAA 1203 0.4223 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDSATLIKKLNRSGKHAELWSQKANQNQKQKNNNNINNVKDDKNNKGQKQGLVKGLEAAFKNHQQQQQKFPAFSSEEDDEYYDYDDEDDDDEELRFIREKANQLQLLRQQQQAVVDANNNVKKAISAASNNGHNKMNNAAGKKGGQNQNMGGMKESNVGFDQKTMAALKLNNAHLGGGESLNLGEAKRANDIGAMMNLAGFNGGNAGNATVLGGNSNGMGGFPVQSNNMFQGNSPAAVPNGGYAPSMLMNMNGFNNHQSPMMNMNMMQTRHAMQQQPQMMFHRSPVIPPNTGYYFNHNNYNPAANYSYYASLPSYPGGDYDHDHHSAAHMFSDDNTTSSCSVM* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0375 400 Coils Coil 164 184 - -
Lja5g0375 400 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Lja5g0375 400 MobiDBLite consensus disorder prediction 81 106 - -
Lja5g0375 400 CDD HMA 16 75 IPR006121 GO:0046872
Lja5g0375 400 Pfam Heavy-metal-associated domain 17 72 IPR006121 GO:0046872
Lja5g0375 400 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 1 400 - -
Lja5g0375 400 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 37 1 400 - -
Lja5g0375 400 MobiDBLite consensus disorder prediction 81 98 - -
Lja5g0375 400 MobiDBLite consensus disorder prediction 120 144 - -
Lja5g0375 400 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Lja5g0375 400 Gene3D - 12 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0375 Lja-Chr5 3328637 3330389 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0375 5 3328637 3330389 Lja5g0375 5 3328637 3330389 ECH