Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0367 ATGGTGCCTTTTGGCGGGAAAAAGGTGACCCAAATTGTCACCGGCTTCGGCGGCAGTGGCCTCGGCCAGGTCGTAATCGCCGTCGCCGTCTCCTTCCTCGTCCGCGTCTTCTCCGTCCCCGGCCCTGCCCTCTCGCCGGAAAACGACGATGCACCCAACGACGATTCCCACGACGGTGAAACTTCACCCTCCGGGAAGGTCACGCCGGTCACTATCCGATGGAGTAACATCAACTGCTCCCTTTCTGATAAATCCTCCAAGTCCGTGAGGTTTTTGCTTAAGAATGTGAGTGGAGAAGCGAAGCCTGGAAGATTATTAGCCATAATGGGGCCTTCAGGTTCAGGGAAGACAACGTTGCTGAATGTTCTCGCGGGTCAGCTGGCCGCATCGCCGCGGCTGCATTTGTCTGGTCTTTTGGAGTTCAATGGAAAGCCTGGTTCCAAGAATGCTTACAAGTTTGCTTATGTGAGACAGGAGGATCTCTTTTTCTCGCAGCTCACTGTGCGGGAAACATTGTCTCTTGCTACTGAACTTCAGCTTCCCAATATATCTTCTGCGGAAGAGAGAGATGAATACGTGAACAATCTCCTTTTCAAATTAGGCTTGGTCAGCTGTGCTGATACCAATGTTGGTGATTCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCCATGGCATGTGAACTGCTCGCAAGCCCATCGGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCGTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTGCACAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCGAGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTAACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGACGAACCATTGACATACTTCTCAAAATTCGGGTACCACTGCCCGGATCATGTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTGCTGACAGTGTCTATTCATCTCGAAAAAGGATTGATGGGCTTGTTGAGTCATTCTCTCAAAGACTATCTACAGTAATATATGCAACACCAATTACTATAGATGATATCTCAAAAAGTAGAAAGAAAATCAGCCAGAGGACTGTAGCAAAGAAGAAAGGTGGTTGGTGGAAGCAATTTTGGTTGCTCCTTAAACGAGCATGGATGCAGGCTTCACGTGATGCTCCTACCAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGCAATTATTTTTGGGTCAGTTTTCTGGAGGATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATTAACACAGCTATGGCCGCTCTCACAAAGACTACTGGTGTGTTTCCGAAGGAACGGGCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCTTATCTGTTTTCAAAACTGTTGGCCGAGGCTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTCTGTACCCTATGGCGCGCCTTCATCCTACATTGATGAGATTTGGAAAATTCTGTGGAATTGTCACTATGGAATCTTTTGCGGCATCTGCGATGGGTCTTACTGTTGGAGCTATGGTTCCAACTACTGAAGCAGCTATGGCAGTAGGCCCCTCTCTTATGACTGTTTTTATTGTTTTTGGAGGCTACTATGTTAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAGGGACTTTGCATTAATGAATTTAGAGGTCTTCAATTTGATCATCAGCATTCATTTGATGTTCAAACAGGAGAACAGGCACTCGAGCGAATTTCCTTTGGAAAAAGTAGGATTATGGATACGGTGGTAGCACAAAATAGAATACTGTTGTTTTGGTATTGCACCACCTACCTTCTCCTGGAGAAAAATAAGCCCAAATACCAGCAACTTGAAACACCCCCTCTTGACCATGAAAGACCACATTTAGAACTGGAGGAGTTCAATTCTGAACAACCTGACCAGACACCTGAAGCTCCACCCGTTAACCAAGTTGATTCCAATCAGCCCCTTGAGTCACCTGATGTAGATCCTGTTGGCCCTTTTATGCTAGAAGCTTTTTTGCTGTTGGATACTAAAAACGTGTTTTTTTTTTTCTCATGA 2211 0.4536 MVPFGGKKVTQIVTGFGGSGLGQVVIAVAVSFLVRVFSVPGPALSPENDDAPNDDSHDGETSPSGKVTPVTIRWSNINCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPGSKNAYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDEYVNNLLFKLGLVSCADTNVGDSKVRGISGGEKKRLSMACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPARDEPLTYFSKFGYHCPDHVNPAEFLADLISIDYSSADSVYSSRKRIDGLVESFSQRLSTVIYATPITIDDISKSRKKISQRTVAKKKGGWWKQFWLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTTGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEAPIGAAFPLMFGAVLYPMARLHPTLMRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFRGLQFDHQHSFDVQTGEQALERISFGKSRIMDTVVAQNRILLFWYCTTYLLLEKNKPKYQQLETPPLDHERPHLELEEFNSEQPDQTPEAPPVNQVDSNQPLESPDVDPVGPFMLEAFLLLDTKNVFFFFS* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0367 736 MobiDBLite consensus disorder prediction 43 68 - -
Lja5g0367 736 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 673 - -
Lja5g0367 736 Gene3D - 64 307 IPR027417 -
Lja5g0367 736 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 318 IPR003439 GO:0005524
Lja5g0367 736 MobiDBLite consensus disorder prediction 684 710 - -
Lja5g0367 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 304 IPR027417 -
Lja5g0367 736 Pfam ABC-2 type transporter 275 331 IPR043926 GO:0140359
Lja5g0367 736 SMART AAA_5 102 295 IPR003593 -
Lja5g0367 736 ProSitePatterns ABC transporters family signature. 218 232 IPR017871 GO:0005524
Lja5g0367 736 Pfam ABC-2 type transporter 395 605 IPR013525 GO:0016020|GO:0140359
Lja5g0367 736 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 673 - -
Lja5g0367 736 CDD ABCG_EPDR 69 300 - -
Lja5g0367 736 Pfam ABC transporter 93 245 IPR003439 GO:0005524
Lja5g0367 736 MobiDBLite consensus disorder prediction 686 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0367 Lja-Chr5 3250784 3259138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0367 92 300 Calmodulin-binding Proteins AT2G36910 26.941 2.75e-10 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0367 5 3250784 3259138 Lja5g0367 5 3250784 3259138 ECH