Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0364 ATGTCAGGAACTTTGCATAAAAGTAATATGAGGTCTAACGGCGAAGATCTTCGAACCGCTCTACAACCTTTGTTGAAGCTTCTTAGTCTTACAGTCATAGGATTACTTCTTGCAAACCCAAAAATGCAATTGATTCCAAAAGCCACATTCAAACTCCTCAGCAAACTTGTATTTGCCCTGTTCTTACCCTGCCTAATCTTCAGTGAACTTGGTGAAAGCATAACTCTTAAAAAATTTGTGGAGTGGTGGTTTATCCCAGTTAATGTCCTTGTGAGCACAGCTCTAGGATGCATACTAGGGTACATAGTGGTGGCTATATGTCGGCCGCCGCCGCGGTTCAACAGATTCACTATCATCATGACAGGATTTGGAAATACTGGAAATCTCCTTCTTGCTATAGTTGGATCTGTTTGCCACAACACTGAGAACAGCCTATTTGGAAAAGAATGCAACACAAGTGGGGTGGCTTATGTCTCTTGGTCTCAATGGGTTTCTGTGATTCTTGTTTACACCTTTGTTTATCACATGATGGAGCCTCCTATGGAGTACTATGAGATTGTTGAGGATGAGGCTGAAATCAATGAAGAAGGGCCACTTAATGATATCAGTAGGCCACTCCTTGTAGAAGCTGAGTGGCCTGGCATTGAGGATAATGAGACTGAACATTCCAAAACACCCTTTATTGCAAGGATCTTTAAGAGCATTTCAGGTATGTCCTCTTCTAGTATTCCAGACTTTGACATCACAGCAGAAAGCAGTGGGAGCAGCACAATGTCCCTTAGGTGTTTAGCTGAGCCTAGAGTTGTTAGGAAGATCAGAATTGTTGCAGAGCAAACTCCAATTCAACAGATACTTCAACCCCCAACAATTGCATCTCTACTAGCTATCATCATTGGCACAGTGCCTCAGCTGAAAACATTTTTCTTTGGAAATGATGCTCCAATGTCTTTTATGACAGACAGTTTGGCGATTTTAGCCGGCGCAATGGTACCTTCTGTGATGCTTATACTTGGGGGCATGCTGGCTGAAGGGCCAAATGAATCAACACTTGGAATCAAAACTACAATTGGAATCATTGTGGCCAGACTAGTGGTGCTTCCTCTCCTAGGAATTGGGATTGTGGTGTTGGCTGATAAGCTAAATTTCTTGGTTGAGAATGATGCAATGTTTAGATTTGTGCTTCTGCTGCAGTACACAACACCAAGTGCCATTTTACTGGGTGCAATTGCAAGCTTGAGGGGTTATGCAGTAAGTGAAGCTTCAGCAATTCTCTTCTGGCAGCATGTGTTGGCTCTTTTCTCTCTTTCTGTGTACATTGTAATTTACTTTAGAATAATTGTCTAA 1344 0.4219 MSGTLHKSNMRSNGEDLRTALQPLLKLLSLTVIGLLLANPKMQLIPKATFKLLSKLVFALFLPCLIFSELGESITLKKFVEWWFIPVNVLVSTALGCILGYIVVAICRPPPRFNRFTIIMTGFGNTGNLLLAIVGSVCHNTENSLFGKECNTSGVAYVSWSQWVSVILVYTFVYHMMEPPMEYYEIVEDEAEINEEGPLNDISRPLLVEAEWPGIEDNETEHSKTPFIARIFKSISGMSSSSIPDFDITAESSGSSTMSLRCLAEPRVVRKIRIVAEQTPIQQILQPPTIASLLAIIIGTVPQLKTFFFGNDAPMSFMTDSLAILAGAMVPSVMLILGGMLAEGPNESTLGIKTTIGIIVARLVVLPLLGIGIVVLADKLNFLVENDAMFRFVLLLQYTTPSAILLGAIASLRGYAVSEASAILFWQHVLALFSLSVYIVIYFRIIV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0364 447 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN-RELATED 6 446 - -
Lja5g0364 447 Pfam Membrane transport protein 20 439 IPR004776 GO:0016021|GO:0055085
Lja5g0364 447 PANTHER PROTEIN PIN-LIKES 2 6 446 IPR039305 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0364 Lja-Chr5 3224098 3225798 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0364 5 3224098 3225798 Lja5g0364 5 3224098 3225798 ECH