Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0346 ATGGGTAACTACGTTTCATGCACTTTAGCACCTTCTCTGATGAGAACCTCGAAGGCAACGAGGGTAGTCTTCCCCTCCGGCGAGGTGAAGCAGTTCAGGGAGATCGTGAAGGCGGCGGAGCTCATGCTGGAACACCCCACTTATTTCCTTGTGAATTCACGGTCGCTGCAGATTGGTCGGAGATTCTCCGCTCTCGGCGCCGACGAGGAGCTGGAGTTTGGGAACGTGTACATCTTCTTTCCGATGAGGAGGGTCAACTCTTTCGTCACGGGTGCTGACGTGGCGGTGCTGTTTTTGGCGGCTAATTCCGCCGCCAAACGGTTGTCTGCTGGGAAGACACGTGTCCAGCCGGAGAACGGTGGCGGAGAGTGGCAGCAGGGTGAGGCTGCGGCGGAGGAAGGTGAGGACAAAGACGAGGTTCCGAGGTTGAGTTTGGAAGGAGTTGACTCTGGGTTTCGGTATCGGTTGAGTTATTGTAGGTCAAAGATGCCTGTTTTGGAAACTATAAAGGAAGAAACAAGTAGATCAGCAAGGTGA 537 0.5419 MGNYVSCTLAPSLMRTSKATRVVFPSGEVKQFREIVKAAELMLEHPTYFLVNSRSLQIGRRFSALGADEELEFGNVYIFFPMRRVNSFVTGADVAVLFLAANSAAKRLSAGKTRVQPENGGGEWQQGEAAAEEGEDKDEVPRLSLEGVDSGFRYRLSYCRSKMPVLETIKEETSRSAR* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0346 178 Pfam PADRE domain 1 171 IPR025322 -
Lja5g0346 178 PANTHER DUF4228 DOMAIN PROTEIN 1 174 - -
Lja5g0346 178 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 174 - -
Lja5g0346 178 MobiDBLite consensus disorder prediction 110 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0346 Lja-Chr5 3119575 3120998 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0346 5 3119575 3120998 Lja5g0346 5 3119575 3120998 ECH