Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0334 ATGGGATTGGTCACCACCACCGTTCATATGAACCTCATCGTTCCTCAATTCGGGCCGCTCCGAAACCACTCCACCTCCATTCGGGTCAGCACCTCCGCCCGGAACAGAAGGAGCAGTTTAGCTGGATTTGTTTGCTTCGCCGCCGCTGATGACGACGCCAGACAGAACCAGCAACCGTTGAGCACCACCGCAACTGGACCCGCCTCCGCCCTTGAAGAAAGACCTGCTACTGATCTGCTTAATAGTACCACTGAAGAAACACTGGGAAATTTGGAGCAAGATGGTGAAAAAGGTGCTCTCTATGATTTTCTATATCCTAGTAAAGAGCTTCTTCCTGATGATAAAGAAATGAGCATATTTGATCATCTTGAAGAGCTGCGACAGAGAATATTTGTATCAGTTCTAGTAGTTGGAGCAAGCATTTTGGGATGCTTTGCATATTCCAAAGAACTGGTAAAGCTTCTTGAAGCTCCAGTTAAATCAGAGGGTGTAAAGTTTCTTCAGCTAGCTCCTGGCGAATTCTTCTTCACAACTTTAAAGGTGTCTGGATACTCTGGCATCCTATTGGGAAGTCCCATCATCCTCTACGAAATCATAGCCTTTGTGCTTCCAGGTCTAACAAAATCTGAAAGAAGGTTTCTAGGGCCGATTGTTTTAGGCTCATCGGTTCTTTTCTATGCCGGGATAGCCTTCTCCTACTTAGTTCTGACACCTGCAGCATTAAACTTTTTTGTTGATTACGCCGAAGGTGCTGTTGAATCATTGTGGTCCATAGATCAATACTTTGAGTTTGTTCTGGTGCTCATGTTCAGTACAGGCTTGTCTTTTCAGGTACCTGTTATACAATTTCTATTAGGACAAGTTGGATTGGTGTCTGGAGACCAGATGCTATCAGTTTGGAGGTATGTGGTGGTTGGCGCAGTAGTGGCAGCTGCGATAGTTACACCATCCACCGATCCTCTCACTCAAGTTCTTCTAGCAGGACCCTTGTTAGGTCTTTACCTAGGGGGTGCATGGGCAGTCAAGCTTACAGGACGGTGA 1041 0.4611 MGLVTTTVHMNLIVPQFGPLRNHSTSIRVSTSARNRRSSLAGFVCFAAADDDARQNQQPLSTTATGPASALEERPATDLLNSTTEETLGNLEQDGEKGALYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVSVLVVGASILGCFAYSKELVKLLEAPVKSEGVKFLQLAPGEFFFTTLKVSGYSGILLGSPIILYEIIAFVLPGLTKSERRFLGPIVLGSSVLFYAGIAFSYLVLTPAALNFFVDYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQVGLVSGDQMLSVWRYVVVGAVVAAAIVTPSTDPLTQVLLAGPLLGLYLGGAWAVKLTGR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0334 346 TIGRFAM tatC: twin arginine-targeting protein translocase TatC 119 334 IPR002033 GO:0016021
Lja5g0334 346 Pfam Sec-independent protein translocase protein (TatC) 121 329 IPR002033 GO:0016021
Lja5g0334 346 Hamap Sec-independent protein translocase protein TatC [tatC]. 114 346 IPR002033 GO:0016021
Lja5g0334 346 PRINTS Bacterial Sec-independent translocation TatC protein family signature 210 236 IPR002033 GO:0016021
Lja5g0334 346 PRINTS Bacterial Sec-independent translocation TatC protein family signature 261 289 IPR002033 GO:0016021
Lja5g0334 346 PRINTS Bacterial Sec-independent translocation TatC protein family signature 192 210 IPR002033 GO:0016021
Lja5g0334 346 PRINTS Bacterial Sec-independent translocation TatC protein family signature 118 145 IPR002033 GO:0016021
Lja5g0334 346 ProSitePatterns TatC family signature. 261 280 IPR019820 -
Lja5g0334 346 PANTHER SEC-INDEPENDENT PERIPLASMIC PROTEIN TRANSLOCASE TATC-RELATED 88 346 - -
Lja5g0334 346 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 88 346 IPR002033 GO:0016021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0334 5 3011147 3014546 Lja5g0334 5 3011147 3014546 ECH