Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0333 ATGGAGGGAGAGGATCACAAAATGAAGACACTCAACCTTCTTCGTTCCAGAATCTGCGATCCCAAATTCATCTTCAGCGATTCTTCTTCCGATGAAGGAAACTACAGCAAGCTCAAATTCATGATATCGAGTTCCGTCACGGAGGCGTGCAACAATTCAATTCTGCTTCTCGGTCCCCGTGGCTCCGGTAAACTCGCGGTTTTGGAGCTTGTCATTCAAGATTTGTTTCAACAATATCCCGAATCTCTATCACTGATTAGGTTGAATGGGTTTTTACATTGTGATGACATCTCTGCATTCAAGGAAATAGCTAGGCAGTTATGCATGGATCATCAATTACTATTCTCAAAATCGGCATCATTTGATGACAACTCCCAATTTATGGTAGCCATGCTCAAGGAATGTGGATTAGCACATAAAACTATAATTTTTATTCTGGATGAATTTGACCTATTTGCTCAGGGTAAACAGCGTTTACTTTATAGCTTGCTAGACGCAATGCAGTCAGTAACATCGCAAGCTGTTGTAATTGGCATTAGTTGCCGGCTGGATGCAGATCAGCTATTGGAGAAAAGAGTGCGATCTCGTTTTTCCCATAGAAAGCTGTTATTTTTACCACCTTCAATAGAAGACTCCCAAAGATTACTGGTGCACATGCTGAATTTACCAATAGATTCAAGCTTTCCTCATGATTATGCTGTTGAATTTAATAGAAAGGTCCAAAATATTATAGAAGACAGAAGGTTCAAAGACACTTTCAATAAGTATTTAAGTCTTGACTCCTCTGTCAAACATTTGCTGAGGTTCCTGTTCTGTGCAGTCTCTCATATGGATTTGAAGACAGGATTTTTGTCACCGGAAAACTTTGAAACTGCATTTTCAAGTATCCAGAGGCAGCCCAAACTAGAATGTTTAAAAAGTTGCTCCATCTTAGAACTTTATATTTTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAAAGTTTATGCAACTTCAATGCTGTAATGAAAGAGTATAAAAGTGTACATGATTCCTTCAAGACTGCTGATTATTATGCACGGAATGTCTGCTTAAGGGCATTTGAACATCTTATACATCGTGAATTAATATGTTACACAGACAATAGAGGGCAGAGTTTGTCTGCTGAATTTCGTCCTGCAAAGCTTTTAATTTCACCCCCTGAACTACATCAGGGACTAAAAGCGTATCCTTCATGCCCTCCTATCCTTCAAAAGTTAACTGCACCGTGA 1251 0.3917 MEGEDHKMKTLNLLRSRICDPKFIFSDSSSDEGNYSKLKFMISSSVTEACNNSILLLGPRGSGKLAVLELVIQDLFQQYPESLSLIRLNGFLHCDDISAFKEIARQLCMDHQLLFSKSASFDDNSQFMVAMLKECGLAHKTIIFILDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQRLLVHMLNLPIDSSFPHDYAVEFNRKVQNIIEDRRFKDTFNKYLSLDSSVKHLLRFLFCAVSHMDLKTGFLSPENFETAFSSIQRQPKLECLKSCSILELYILVCMKRLEVKEQSLCNFNAVMKEYKSVHDSFKTADYYARNVCLRAFEHLIHRELICYTDNRGQSLSAEFRPAKLLISPPELHQGLKAYPSCPPILQKLTAP* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0333 416 CDD AAA 52 200 - -
Lja5g0333 416 Gene3D - 32 206 IPR027417 -
Lja5g0333 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 249 IPR027417 -
Lja5g0333 416 Pfam ATPase family associated with various cellular activities (AAA) 54 200 IPR003959 GO:0005524|GO:0016887
Lja5g0333 416 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 216 398 IPR032705 -
Lja5g0333 416 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 414 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Lja5g0333 416 PIRSF ORC4 4 415 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0333 1 413 Core DNA Replication Machinery Family AT2G01120 64.846 0.0 559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0333 5 3006340 3010291 Lja5g0333 5 3006340 3010291 ECH