Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0329 ATGGCGTGTTCAACCCTCAAACTCAACTCTCTCTCGATCACCAACAACTCCTTCTCTTCACGCCGTGGATCTCCTTCTCTCTCCACCACTCGCCGAGTCTCCCTCCCGATCCGCGCCTCTTCTTACACCGATGAACTCATCACAACCGCCAAAACTATTGCGTCTCCTGGTCGTGGAATACTTGCAATTGATGAGTCAAACGCGACCGCTGGGAAGCGTTTGGCATCGATTGGATTGGACAACACGGAGACCAATCGCCAGGCCTACAGGCAACTTCTGCTGACCACACCTGGCCTTGGTGAATACATCTCTGGTGCCATTTTTTTCGAGGAAACCCTTTACCAGTCAACCACTGATGGAAAGAAGTTTGTGGACTGTCTTCGTGAGGAGAACATTGTACCTGGAATCAAAGTTGATAAGGGTTTGGTCCCTCTGCCAGGGTCAAACAATGAATCTTGGTGCCAAGGGTTGGATGGATTGGCTTCAAGATCTGCTGAATACTACAAGCAAGGTGCTAGATTTGCCAAGTGGAGGACAGTTGTCAGCATTCCTTGTGGTCCTTCTGCATTGGCCGTTAAGGAAGCAGCATGGGGACTTGCACGTTACGCTGCTATCTCTCAGGACAATGGCCTTGTTCCAATTGTAGAGCCTGAAATTCTTCTTGATGGGGACCACCCAATCGAGAGGACATTGGAAGTGGCCGAGAAGGTCTGGTCTGAAGTCTTCTTCTATTTGGCTGAAAACAATGTCGTTTTTGAGGGAATTTTGCTCAAACCTAGCATGGTTACGCCTGGAGCGGAACACAAGCAAAAGGCTTCTCCAGAAACTATTGCCAATAACACACTAACCATGCTTAGAAGGAGAGTTCCTCCAGCAGTCCCTGGAATCATGTTTCTGTCGGGTGGACAATCTGAAGTGGAAGCCACACTAAATCTCAATGCTATGAACCAAAGTCCAAACCCATGGCATGTTTCGTTCTCGTATGCAAGAGCTCTGCAGAACACTGTGCTTAAGACTTGGCAAGGACGCCCTGAAAATGTGGAAGCTGCGCAGAAGTCTCTCTTGATCCGCGCTAAAGCAAACTCCTTGGCTCAACTTGGAAGATACTCTGCTGAGGGTGAAAGTGAAGAAGCACAGAAAGGAATGTTTGTCAAGGGCTACACCTACTAA 1170 0.4863 MACSTLKLNSLSITNNSFSSRRGSPSLSTTRRVSLPIRASSYTDELITTAKTIASPGRGILAIDESNATAGKRLASIGLDNTETNRQAYRQLLLTTPGLGEYISGAIFFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVFEGILLKPSMVTPGAEHKQKASPETIANNTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGRPENVEAAQKSLLIRAKANSLAQLGRYSAEGESEEAQKGMFVKGYTY* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0329 389 SUPERFAMILY Aldolase 36 389 - -
Lja5g0329 389 Gene3D Aldolase class I 27 388 IPR013785 -
Lja5g0329 389 CDD FBP_aldolase_I_a 44 369 - -
Lja5g0329 389 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 389 - -
Lja5g0329 389 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 250 260 IPR029768 -
Lja5g0329 389 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 389 IPR000741 GO:0004332|GO:0006096
Lja5g0329 389 Pfam Fructose-bisphosphate aldolase class-I 45 389 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0329 Lja-Chr5 2961891 2965030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0329 40 389 Miscellaneous Gene Families AT3G52930 55.367 2.71e-134 387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0329 5 2961891 2965030 Lja5g0329 5 2961891 2965030 ECH