Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0328 ATGTTCTGTTGGGAACAACGAAACCAGAGAGAGAGGCATGAATTGAAGGAGAGTGAGACTCGTGAACCCTACGACGCCACCCTCAACACAACCACCATGTCTCAGAATGGTTCCTTCGACCACCGCCCTCGTGCGGCGTCCAACGGAGAAGCAGCGGCGGCGGTGGCTGGTGGTTCCAACACGCTCCGTGCGAGCCCCAAACGAGACCACAAGCCAGACAACTACGAAGACCTTCAATTGGACTTCAACCCTCTCGTCTTGAGCTCCCTCGAGCGTTATCTTCCTCTTCACATGCTCAACATGTCACGAGACAGCAAGGCTCAGTACATGAGGAACATCCTCCTCCGATATTTACCTGACACTGAACGCGTTCGGATTCAAAAGCACAAGGAATACAGGCAAAATATCATATTGAATTATCCACCGCTACATAAGGAGATATATACTATGCATTCTGAAAACTTTTTTGTGCCCTCATTTCTTCAAGCAATTAAAGAAAATACAAAAGCTGGTTTTAGAAGTGTAATGGCTGAGCCCTCCAGAGGGATTTATACGTTTGCAATGCTTCAACCACAGTTTTGTGAAATGTTGGTATCGGAGGTGGATCATTTTGAAAGATGGGTCCATGAGACCAAATTCAGAATCATGCGGCCAAATACAATGAATCAATATGGCGCTGTTCTTGATGATTTCGGCATGGAAACCATGCTTGAGAGATTAATGAATGAATTCATACGTCCTATATCTCAAGTTTTCTTTACTGAAGTTGGTGGATCCACACTGGACTCTCATCATGGTTTTGTTGTTGAATATGGAACCAATAGGGATGTAGAACTTGGTTTCCATGTGGATGACTCAGAAGTCACCTTAAATATTTGCTTGGGGAATCGATTTTCTGGTGGAGAACTGTTCTTCCGAGGTGTTCGATGTGATGAACATGTAAATACAGAGGCCCAATTAGAGGAGATCTTCGATTATTCCCATAGGCCAGGACATGCAATCCTTCATTGTGGTCGTCACCGGCACGGTGCTAGACCTACAGTTTCTGGGGAACGGATCAATTTAATTCTCTGGTGTAGAAGTTCGGCTTTTAGAGAGATGAAGAAATATATGAAAGATTTTTCTAGCTGGTGTGGAGAATGCAGGCGGAAGAAGAAGGAGAAAGAGCGTGTAGCAGTTGCTGCCACCAAAGAGGAATTACTGAAGAGGGAACTTAAGTCAGCCTCGTGA 1230 0.4504 MFCWEQRNQRERHELKESETREPYDATLNTTTMSQNGSFDHRPRAASNGEAAAAVAGGSNTLRASPKRDHKPDNYEDLQLDFNPLVLSSLERYLPLHMLNMSRDSKAQYMRNILLRYLPDTERVRIQKHKEYRQNIILNYPPLHKEIYTMHSENFFVPSFLQAIKENTKAGFRSVMAEPSRGIYTFAMLQPQFCEMLVSEVDHFERWVHETKFRIMRPNTMNQYGAVLDDFGMETMLERLMNEFIRPISQVFFTEVGGSTLDSHHGFVVEYGTNRDVELGFHVDDSEVTLNICLGNRFSGGELFFRGVRCDEHVNTEAQLEEIFDYSHRPGHAILHCGRHRHGARPTVSGERINLILWCRSSAFREMKKYMKDFSSWCGECRRKKKEKERVAVAATKEELLKRELKSAS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0328 409 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 48 407 - -
Lja5g0328 409 Gene3D q2cbj1_9rhob like domain 181 361 - -
Lja5g0328 409 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 48 407 - -
Lja5g0328 409 MobiDBLite consensus disorder prediction 24 42 - -
Lja5g0328 409 MobiDBLite consensus disorder prediction 1 75 - -
Lja5g0328 409 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 262 361 IPR005123 -
Lja5g0328 409 MobiDBLite consensus disorder prediction 1 23 - -
Lja5g0328 409 SMART p4hc 181 360 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0328 Lja-Chr5 2945164 2950759 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0328 5 2945164 2950759 Lja5g0328 5 2945164 2950759 ECH