Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0323 ATGGAAAAGGTTTGTGAATTCTGCTCAGCTTTGAGGCCCCTTGTTTACTGTAAGTCTGATGAAGCATATCTTTGTCTGTCCTGCGATGCGAAGGTCCATTTGGCAAATGCATTGTCCGGCCGACACCTCCGGACCCTTGTGTGTAACTCGTGCAGATACCATCTTGCTTATGTTCGGTGCTTGGAGCACAAAATGTTAATCTGTCGAGACTGTGATCAAAAGATGCATGATGTTTCTTTACCGCATCATAGGCGACCTATCAGATCTTTTATGGGTTTCCCTTCTGCCAGAGACTTTGCAGCACTCTGGGGTTTTGAATTGAATGAGATTGAAAACAGTGCCAATCAGGACCAGTTTGCATCTAGTTCTTCTGTTTCTGCACATTTGAATGTTGTACAAGTTTCAGGAAAGCCTGACATTCGAACAAGGGGGGGCTTAAGCAGTCAACATGACAAGGTATTGTACTGTGATCAAGAGCGACGAGCTATTTTGCAGCAGATTGTTGATTTAAAACGGTTTCAGCTAAATGAGGAGAGTGGCCATTCTGCAAAGATAAATGGGTTAAGAGAAAAAGACTTGTCTCCTTCCGTATATCATACTCAAAAGAAATTAGATGACAAGTTCAATCAGCAAGCACAAAATTCCCAGGATCTTGCTACTAATCTTCTTCGAACAGGCAGTTCCCATGCAGAGATGAATCCTGAAACTTTCTCTTCTACGTTTTCTGAACTTGATAGTTTGTCTTCATCTTCAGTTATAGAGCTTCCCTTGCATGGAGAGTTGTTTTGGACATCGAGAATTCCACTTCAAAATAATCAGTTGTGGTCTCAAAATATTCAAGACCTTGGGATATGTGAAGAACTTGTTTGTCAGGATGATTTTAACATACCTGATGTTGACTTAACCTTCCAAAACTTTGAGGAACTATTTGGAGGAGATCAAGACCCAATTAGAGTAATGCATGGTGATGAAGATGTCTCCTTCTCTTCTTTAGAGAAGGATATGTCAGTCGATAAGTCAGATATCTTCAATACAAGTGCAATGGAGGACTCTTCGGCAGCTGCATCCGTTACTATTTCGCACTCTGATCATGAGAACAAGGATATGAATCCTCTCAACCAGTACAATCTAAGAAGCAGGGATCATGCACATACAATTCGGCCTTTTCAGTCAACTATATCACTCTCCGATTTGAGATTCAGTGCTGAAAGTAATCACAGTGATCGCAATGACAGCGCCCTTTCTCCCTACAGTGAAGGGAAAGACTATTTTGGAAATTAA 1281 0.413 MEKVCEFCSALRPLVYCKSDEAYLCLSCDAKVHLANALSGRHLRTLVCNSCRYHLAYVRCLEHKMLICRDCDQKMHDVSLPHHRRPIRSFMGFPSARDFAALWGFELNEIENSANQDQFASSSSVSAHLNVVQVSGKPDIRTRGGLSSQHDKVLYCDQERRAILQQIVDLKRFQLNEESGHSAKINGLREKDLSPSVYHTQKKLDDKFNQQAQNSQDLATNLLRTGSSHAEMNPETFSSTFSELDSLSSSSVIELPLHGELFWTSRIPLQNNQLWSQNIQDLGICEELVCQDDFNIPDVDLTFQNFEELFGGDQDPIRVMHGDEDVSFSSLEKDMSVDKSDIFNTSAMEDSSAAASVTISHSDHENKDMNPLNQYNLRSRDHAHTIRPFQSTISLSDLRFSAESNHSDRNDSALSPYSEGKDYFGN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0323 426 CDD Bbox1_BBX-like 4 47 - -
Lja5g0323 426 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 410 - -
Lja5g0323 426 MobiDBLite consensus disorder prediction 354 373 - -
Lja5g0323 426 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Lja5g0323 426 MobiDBLite consensus disorder prediction 404 426 - -
Lja5g0323 426 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Lja5g0323 426 SMART bboxneu5 1 47 IPR000315 GO:0008270
Lja5g0323 426 SMART bboxneu5 48 87 IPR000315 GO:0008270
Lja5g0323 426 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0323 Lja-Chr5 2845030 2847873 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0323 1 317 C2C2-CO-like Transcription Factor Family AT1G68190 40.312 1.17e-69 223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0323 5 2845030 2847873 Lja5g0323 5 2845030 2847873 ECH