Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0318 ATGCCAGAAATTCAGTTGGGTTCACACACTATCAGATCACATGGAGCTAGAGTCGCAAGGACACATATGCATGACTGGCTGATTCTTTTGCTTCTTGTGGCCATTGATGCCGTCCTAAATGTAATAGAGCCATATCATCGTTTTGTTGGAGAAGGGATGATGTCAGAACTTAGATACCCAATGAAAGCAAATCTTATTCCATTTTGGGCTGTTCCGTTAATAGCAATATTGTTGCCACTTGTTGTCATTCTCACTTACTATTTCATCCGAAATGATGTTTATGACTTTCATCACGCTATATTGGGCCTTTTATTTTCAGTAGTCATTACTGCGGTGATAACGGATGGTATCCAAGATAGTGTTGGACGGCCGCGGCCAAATTTCTTCTGGCGTTGTTTTCCTGATGGAAAAGGGGTGTATGATCCAGTAACAGGTGATGTTAGGTGCACTGGAGATAAGGGTGCTATTAAGGAAGGGCACAAAAGTTTCCCGAGTGCACATACCTCTTGGTCCTTTGCTGGTCTTGTTTATCTAGCTTGGTATCTTTCTGGAAAATTAAGGGCATTTGACCGAAGGGGCCACATTTCAAAGCTCTGTCTTGTTCTCTCACCAATCCTCCTGGCAGCTCTGGTTGCTGTGTCTCGTGTTGATGATTATTGGCATCATTGGCAAGATGTGTTTGCTGGAGCTGTTCTAGGGACGACAATTGCTTCCTTTTGTTACTTACAATTCTTTCCACTTCCATATGACATAGATGGTTGGGGACCTCATGCATATTTCCACATGTTAGCTGAATCTCGTAATAGTGCTCGGGCTCCTTCCATCAACAATGACAATCATTACGCGCAATCGGCAGAGCTTCAGACAGTAGCTCTGTATATCCCACCTGAACATGGAGGAGATACACGAGGAAATAGCTGGGATTCAAGCCCCAGGTTGCAGGGTGGACTACAAAATGCAAGGACACAACACTAA 975 0.439 MPEIQLGSHTIRSHGARVARTHMHDWLILLLLVAIDAVLNVIEPYHRFVGEGMMSELRYPMKANLIPFWAVPLIAILLPLVVILTYYFIRNDVYDFHHAILGLLFSVVITAVITDGIQDSVGRPRPNFFWRCFPDGKGVYDPVTGDVRCTGDKGAIKEGHKSFPSAHTSWSFAGLVYLAWYLSGKLRAFDRRGHISKLCLVLSPILLAALVAVSRVDDYWHHWQDVFAGAVLGTTIASFCYLQFFPLPYDIDGWGPHAYFHMLAESRNSARAPSINNDNHYAQSAELQTVALYIPPEHGGDTRGNSWDSSPRLQGGLQNARTQH* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0318 324 Pfam PAP2 superfamily 100 245 IPR000326 -
Lja5g0318 324 SMART acid_phosph_2 100 241 IPR000326 -
Lja5g0318 324 MobiDBLite consensus disorder prediction 303 324 - -
Lja5g0318 324 PANTHER LIPID PHOSPHATE PHOSPHATASE 2 1 296 - -
Lja5g0318 324 CDD PAP2_containing_1_like 57 244 - -
Lja5g0318 324 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 19 250 - -
Lja5g0318 324 MobiDBLite consensus disorder prediction 301 324 - -
Lja5g0318 324 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 21 249 IPR036938 -
Lja5g0318 324 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 296 IPR043216 GO:0006644
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0318 Lja-Chr5 2814345 2818756 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0318 1 290 Lipid Metabolism Gene Families AT1G15080 70.345 9.06e-149 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0318 5 2814345 2818756 Lja5g0318 5 2814345 2818756 ECH
Lja5g0318 5 2814345 2818756 Lja1g2507 1 29062282 29066700 ECH