Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0316 ATGGCGCGGCGGTTTTGGCCATCGTTTCAGAATCAGGGAGAGGTGAGACAGGTTGATCCTTGTGCTCATACTATAAGGTCCCATGGAGCCGCACTTGCAAGGAATCACATTCGTGATTGGCTTATATTGGTGCTTCTTATGGTAATAGAGGTTGTGCTCTTTGTCATTCATCCATTTCACCGCTTTGTCGGGAGGGACATGATGGAAGACCTTAGATATCCTATGAAAGACAATACTGTGCCTGTATGGGCTGTTCCTCTATATGCGGTTCTGTTGCCAATGGCCGTTTTCCTTTTCATCTACATGCGAAGGAGAGATGTTTATGATTTGCACCACAGCGTTCTAGGCCTTCTCTTTGCTGTCCTGATCACCGGCGTCTTGACAGATGCGATAAAAAATGGAGTTGGCCGGCCTCGTCCAGACTTCTTTTGGCGTTGCTTTCCCGATGGAGTAGAGGTTTATGATGATAAATGGGGAGGTGTGATATGTCATGGCAAAGAGAGTGATATCAAAGAAGGACACAAGAGTTTCCCAAGCGGTCATACATCATGGTCGTTTGCAGGTCTAGGTTTCCTCTCTTTGTACCTATCAGGGAAGATTAAAGTTTTTGATCGCAGAGGGCACGTGGCAAAATTATGCATTGTGTTTATTCCTCTACTTGTTGCTTGTCTAGTTGGAATCTCTAGAGTGGATGATTATTGGCATCATTGGCAAGATGTGTTCGCTGGCGGCCTTCTAGGGCTTGTTGTTGCAACCTTTTGCTATATGCAGTTCTTCCCTCCTCCTTACAATGATGATGGATGGGGTCCATATGCATATTTCCAGGCTATGGAGGAATCACGAGTCAATTCAAACATGAACCGGGATTCACCCTCTGTACAGGCAATGGAGGATCGGGTTATGAATCAAGTACCAGTAAGGAGAACTAATGGTGATGCATTCACCCCTTTCTCTTATCTTAGCCCAACTTTGGAAGCCATGGAGCTAGGACAGAAGTGA 999 0.4575 MARRFWPSFQNQGEVRQVDPCAHTIRSHGAALARNHIRDWLILVLLMVIEVVLFVIHPFHRFVGRDMMEDLRYPMKDNTVPVWAVPLYAVLLPMAVFLFIYMRRRDVYDLHHSVLGLLFAVLITGVLTDAIKNGVGRPRPDFFWRCFPDGVEVYDDKWGGVICHGKESDIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKVFDRRGHVAKLCIVFIPLLVACLVGISRVDDYWHHWQDVFAGGLLGLVVATFCYMQFFPPPYNDDGWGPYAYFQAMEESRVNSNMNRDSPSVQAMEDRVMNQVPVRRTNGDAFTPFSYLSPTLEAMELGQK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0316 332 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 36 262 IPR036938 -
Lja5g0316 332 Pfam PAP2 superfamily 114 258 IPR000326 -
Lja5g0316 332 PANTHER LIPID PHOSPHATE PHOSPHATASE 11 330 IPR043216 GO:0006644
Lja5g0316 332 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 11 330 - -
Lja5g0316 332 CDD PAP2_containing_1_like 71 258 - -
Lja5g0316 332 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 34 266 - -
Lja5g0316 332 SMART acid_phosph_2 114 255 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0316 Lja-Chr5 2808050 2814102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0316 15 299 Lipid Metabolism Gene Families AT3G02600 68.512 1.67e-153 431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0316 5 2808050 2814102 Lja5g0316 5 2808050 2814102 ECH