Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0300 ATGGCCAATTCTGATCTCTCATTGCTTTTGCCAAGGGTTCTCATTGTTTCTCGAAGAACTGTCCGCAAGAACAAATTTGTAAATTTTGTTGGTGAGTATCATCTGGATCTCATTGTAAAATATGGAGCTGTCCCTGTCATTGTCCCAAGAGTTAGTGGACTTGATACTCTCTTAGAAAGCTTTGAGCCTATCCATGGAGTTCTTCTTTGTGAAGGTGAAGACATTGATCCTTCTCATTATGAGGCAGAACTGTCTGGACTTTCACTTGATGAGATTGAGAACATCAGGAACCTTCACCCGAGTGATACCACCATTGACAAAGAGAAAGACTCCATTGAGCTAAGGCTTGCAAAGCTCTGCCTTGAAAGGAATATACCTTTTTTAGGTATATGCAGGGGGTCTCAAATCCTCAACGTTTCATGTGGGGGCACACTTTACCAAGATATAGACAAAGAGATATCGGTGAAATGCCCCGAGTCTCAGAGAGTAGTTCATATGAACTATGGAAATTATGATGGACATCGTCATTCGATGAACGTAGTAGCAAACACCCCCTTGCATGATTGGTTTAAGGACTCTTTTGAAGATGAGAAAATGGAGATCATGGTGAATAGTTACCACCATCAGGGTGTGAAGAGACTGGCACAGAGATTTGTTCCAATGGCATATGCTCTGGATGGTTTGGTTGAAGGATTTTATGATCCAAATTCTTATAATCCTCAAGATGGAAAGTTCATTATGGGGCTTCAATTCCATCCAGAGAGAATGAGAAACCCAGACAGTGATGAATTTGATTATCCTGGATGTAGCATGGCTTATCAGGAATTTGTGAAGGCTGTCATCGCATATGAGAAAAGACTTAAGGGCTCAGAATTTATCCCAAGGGCCACAAAGCTAAGTGAGGAACTGGAGCTAAAGAGAAGAGTCATTGTGAAAAGCTTCTCAATCGCTAAAGACATTTACAAGTCTGATTCTCAAATGGTTACAGGCCAAAGTTCTGAACTTGAAGCAGGAGCAAACTTTCTACAGGCAACTACTGCTCTGAGTTTGCAGCAGGAGAAAAGGCTAAAACAGGTTGGTGCAACAGTCAGAAATGGTTCATATTATACACACGTGCTAAAAGTGAATCAGGTGAGGGAGAAGCTTGCTAGGACTATGATGGCAAATATGTCCATAGAACATTTATCTGAATTAATGTCCTTCTACGGATTAATGCGTCAGATATGTTCCGACACATTGGAGAGGAAGATGAATGAACTAGTTCAGGAAGGGAGTTGA 1278 0.4124 MANSDLSLLLPRVLIVSRRTVRKNKFVNFVGEYHLDLIVKYGAVPVIVPRVSGLDTLLESFEPIHGVLLCEGEDIDPSHYEAELSGLSLDEIENIRNLHPSDTTIDKEKDSIELRLAKLCLERNIPFLGICRGSQILNVSCGGTLYQDIDKEISVKCPESQRVVHMNYGNYDGHRHSMNVVANTPLHDWFKDSFEDEKMEIMVNSYHHQGVKRLAQRFVPMAYALDGLVEGFYDPNSYNPQDGKFIMGLQFHPERMRNPDSDEFDYPGCSMAYQEFVKAVIAYEKRLKGSEFIPRATKLSEELELKRRVIVKSFSIAKDIYKSDSQMVTGQSSELEAGANFLQATTALSLQQEKRLKQVGATVRNGSYYTHVLKVNQVREKLARTMMANMSIEHLSELMSFYGLMRQICSDTLERKMNELVQEGS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0300 425 SUPERFAMILY Class I glutamine amidotransferase-like 29 281 IPR029062 -
Lja5g0300 425 Gene3D - 10 290 IPR029062 -
Lja5g0300 425 PANTHER CLASS I GLUTAMINE AMIDOTRANSFERASE-LIKE SUPERFAMILY PROTEIN 4 423 - -
Lja5g0300 425 PANTHER GLUTAMINE AMIDOTRANSFERASE PB2B2.05-RELATED 4 423 IPR044668 GO:0016811
Lja5g0300 425 Pfam Peptidase C26 28 254 IPR011697 GO:0016787
Lja5g0300 425 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 50 286 - -
Lja5g0300 425 CDD GATase1_2 13 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0300 Lja-Chr5 2636640 2639355 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0300 5 2636640 2639355 Lja5g0300 5 2636640 2639355 ECH