Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0289 ATGAAGGCCTCAAATACTCAATACCCATTAAACTCTGTTTCTAAACTCTGCAACATTCAATTCCACTTTCTTCATCTCCTATCCTATATTCTAATCTTGGTATTTGGTCTAACCCTTGGAGTTATCTTCAGTTTCTATCTGAAGGACTGCATCTTTAGCCTACAATTCACTCAGTTCTCGCTCTCCGCCTTACCTCGAGCCCCGCCTCTATCACCACCACCGCCGCCGCCAATTGAAAAGCCAGCAGTATCTAATCACAGCCGTGTGGGATTGAAGGAGTTTCTTAAGCCTCCTGGTGTTGTTATGCATGATATGAATGAGGAGGAATTGATGTGGAGAGCTTCGATGACTGCGAAGATCAATGAGTACCCGTTTGATCGTGTTCCTAAAGTTGCTTTCATGTTTTTGACAAGGGGTCCTGTGTTTCTAGCACCTTTGTGGGAGCAATTCTTCAAAGGGCATGAAGGGTATTACTCCATTTACGTGCATGCCAATCCATCTCATAATGGAACATACCCGGAGAAGTCAGTGTTTCACGGTCGGAGAGTTCCCAGTCAGGAAGTGGAATGGGGCAATCCCAACATGATTGAAGCAGAGCGTCGCTTGCTAGCAAATGCACTCCTTGACATTTCAAACCAACGATTTGTTCTTGTTTCAGAATCCTGCATTCCACTCTTCAACTTCACAACCATCTACTCTTATTTAATAAACTCCACCCAAAACTATGTCATGGCCTTTGATGATCCTAGCCCAGTTGGTCGTGGCCGCTACAGCATCCAAATGTTACCTGAAATCAGCCTCTGGCAGTGGAGAAAAGGGTTCCAGTGGTTTGAAATGGACAGAGAACTCGCAGTTGAAGTGGTTTCTGACAGAACATACTTCCCAGTTTTTCAACAGTACTGCAAAGGTTCATGCTATGCTGATGAACATTACTTGCCAACGTTTGTGAACATCATGTTTGGGGAGAGGAACTCAAATAGGAGCTTGACTTGGGTTGACTGGTCAAGGGGTGGACCCCACCCTGCTTCTTTTACTAGGTCTGATGTGACTGTTGAGTTCTTGGAGAGGTTAAGGAGCAAGAGGTGCAAGTATAATGGGAAAAGCAGCAATGTTTGCTATCTTTTTGCTAGGAAGTTCTTGCCTAGTACTCTGTCCAGGCTTGTTAAGATTGCACCAGAGGTCATGCATTTTGAGTACCACCATAGGCACAAAAACAGAAGCTTATCACTACAACCTACCATTTAA 1245 0.4442 MKASNTQYPLNSVSKLCNIQFHFLHLLSYILILVFGLTLGVIFSFYLKDCIFSLQFTQFSLSALPRAPPLSPPPPPPIEKPAVSNHSRVGLKEFLKPPGVVMHDMNEEELMWRASMTAKINEYPFDRVPKVAFMFLTRGPVFLAPLWEQFFKGHEGYYSIYVHANPSHNGTYPEKSVFHGRRVPSQEVEWGNPNMIEAERRLLANALLDISNQRFVLVSESCIPLFNFTTIYSYLINSTQNYVMAFDDPSPVGRGRYSIQMLPEISLWQWRKGFQWFEMDRELAVEVVSDRTYFPVFQQYCKGSCYADEHYLPTFVNIMFGERNSNRSLTWVDWSRGGPHPASFTRSDVTVEFLERLRSKRCKYNGKSSNVCYLFARKFLPSTLSRLVKIAPEVMHFEYHHRHKNRSLSLQPTI* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0289 414 Pfam Core-2/I-Branching enzyme 131 357 IPR003406 GO:0016020|GO:0016757
Lja5g0289 414 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 80 397 IPR044174 GO:0016757
Lja5g0289 414 PANTHER CORE-2/I-BRANCHING ENZYME 1 63 - -
Lja5g0289 414 PANTHER CORE-2/I-BRANCHING ENZYME 80 397 - -
Lja5g0289 414 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 63 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0289 Lja-Chr5 2556788 2559538 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0289 5 2556788 2559538 Lja5g0289 5 2556788 2559538 ECH