Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0288 ATGGCAGCTCACAGACTCGCTTTGATCATACACAACCCTTCCAACCACGACGAGTTTCTTCTCGTGAAACAGTCGCACCCTCCCAAATTCCACGATGAAGAATACGACTCTTTCATTGATTCTGATCTCTGGGACTTACCCTCCGCACAGTTGAACCGGCAACAACCAGAGTCAGAGACCCCGATCGAGCTGGAGGTTCCTGCCTCACATTCTGAGGACTTCAAATCAAGCCAGTTCGACATCCGTTCAGCTCTCATTGAGGTGTATGAACAGCTAGGATTTGAAGCGGTTGTTGAGGGAGGGTGGAAGTTTCACAAGTATGTGAAGGAAGCTGCGTTTGGACCCGGTTTACCTGTTAACACAGTTTACATTGAGGGAAAATTGGTAGCTGAGGACAAGGACATGCAAGATTCTCGTAAATGGATGTCCGTCAGAAGCTTTGATAACTGGCTTCTTGAAGTGAAACCACATGGTGATCGTGTTGGACCATTGGTAGTTGTTGGTCTTATGAATGACTCATCTATCTCTACAAAGTGGAAAGTCCCTCAAACCATAAACTATCAGGAGTACCCACCTGGTGTTATACTTATACCTATGGGAAGTAGGACAGGAAAGCCTTTTCACACGACAAACATTATGGTGTTTGCACCTGAGAATGCTCTAAATGATTCAAAGGATAGTAATTTTATTGCATGTGGAGATGCACTAATAATTGATCCCGGATGTCTATCAGAGTTCCATGATGAGCTAAAGCAACTTGTTACTGCTTTGCCAAGAAGACTAGTGGTCTTTGTTACTCATCATCACCATGACCACGTAGATGGTCTCTCAGTTATCCAGAAGTACAATCCTGATGCTACTCTGTTAGCACATGAAAATACCATGCGTCGCATAAGCAGAGATGATTGGTCTCTTGGCTATACCTCTGTTACTGGAGATGAAGATATTTACATTGGTGATCAGAGATTGAGAGTTATTTTTGCACCGGGACATACAGATGGTCATATGGCGCTGCTTCATGTGAATACTCATTCCTTAATTGTAGGTGATCATTGTGTGGGTCAGGGAAGTGCTTTATTGGACATAAATTCTGGTGGAAATATGATGGAGTACTTCCAAACCACATACAAATTTCTGGAGCTTGCACCACATGTCTTAATACCAATGCACGGGAGAGTAAATCTCTGGCCAAAGCAGATGCTGTGTGGATATCTGAAGAATCGTAGGAGTAGAGAAGCTAATATCTTGGAAGCAATTCAAGGTGGAGCCAAGACATTGTTTGACATTGTTGCATATGTATATTCTGATGTTGACCGTCGGGCCTGGATTTATGCATCATCAAATGTGAGGCTCCATGTGGATCATCTGGCCCATCAACATAAGTTACCAAAGGATTTTTCTGTAGAAAATTTCAATTCCAGTTTGGTTACATTTGCCGACAGTGTGGGTAAATTATAA 1458 0.4294 MAAHRLALIIHNPSNHDEFLLVKQSHPPKFHDEEYDSFIDSDLWDLPSAQLNRQQPESETPIELEVPASHSEDFKSSQFDIRSALIEVYEQLGFEAVVEGGWKFHKYVKEAAFGPGLPVNTVYIEGKLVAEDKDMQDSRKWMSVRSFDNWLLEVKPHGDRVGPLVVVGLMNDSSISTKWKVPQTINYQEYPPGVILIPMGSRTGKPFHTTNIMVFAPENALNDSKDSNFIACGDALIIDPGCLSEFHDELKQLVTALPRRLVVFVTHHHHDHVDGLSVIQKYNPDATLLAHENTMRRISRDDWSLGYTSVTGDEDIYIGDQRLRVIFAPGHTDGHMALLHVNTHSLIVGDHCVGQGSALLDINSGGNMMEYFQTTYKFLELAPHVLIPMHGRVNLWPKQMLCGYLKNRRSREANILEAIQGGAKTLFDIVAYVYSDVDRRAWIYASSNVRLHVDHLAHQHKLPKDFSVENFNSSLVTFADSVGKL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0288 485 Gene3D - 398 470 IPR036388 -
Lja5g0288 485 SUPERFAMILY Metallo-hydrolase/oxidoreductase 232 462 IPR036866 -
Lja5g0288 485 PANTHER ENDORIBONUCLEASE LACTB2 100 475 - -
Lja5g0288 485 Pfam Metallo-beta-lactamase superfamily 233 351 IPR001279 -
Lja5g0288 485 Gene3D - 227 396 IPR036866 -
Lja5g0288 485 SMART Lactamase_B_5a 224 390 IPR001279 -
Lja5g0288 485 PANTHER ENDORIBONUCLEASE LACTB2 100 475 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0288 5 2541939 2548828 Lja5g0288 5 2541939 2548828 ECH