Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0272 ATGAGACCTACTTCTGAAAAACCCATCGGTGTCATCAATGGCCCGCGTCCTTCACCATTGATGATCAACAAAGACTCCCACATCATACGAAAGCAGAGGGTTCCGATCATCATTTACACGCAATCACCCAAGGTTATCCACACCAAGGCCCAAGATTTCATGGCTCTGGTTCAGAGACTCACCGGCATGACAGCGTCGTCGAGTCACAAAGAAATAGCAACCACTGCGAGTCATCAAGAGGCCTCTGAGACTTTTGGTTCATCTTTGTCTGATATTTCCAACAACAACAGCATCAAACAGCAGGGGATGATGCAGCAGGGTGCTACTGATGGTGATGAAACTAGCTCAGCTCTGAGGAGGGATGGTGAGGATTGTGTTAAGGGTGTTGGTGCAAATGTTCAATTGCAGAGTCCTTCTATTCTGGATTTTGCTAACATGCCACTGTTCACTCCAAATTCATCATCAGATTTCTTTTGTTCATCGTCTCGACCGGTGTACCAGTTTTCCGATTCGCCATATGGGATTTTGGGAAGTTTGATATCCCCTTCAGGATTGGGGTTTATTAAGGATCTGCCTGATTATTAA 585 0.4564 MRPTSEKPIGVINGPRPSPLMINKDSHIIRKQRVPIIIYTQSPKVIHTKAQDFMALVQRLTGMTASSSHKEIATTASHQEASETFGSSLSDISNNNSIKQQGMMQQGATDGDETSSALRRDGEDCVKGVGANVQLQSPSILDFANMPLFTPNSSSDFFCSSSRPVYQFSDSPYGILGSLISPSGLGFIKDLPDY* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0272 194 Pfam VQ motif 42 65 IPR008889 -
Lja5g0272 194 MobiDBLite consensus disorder prediction 69 95 - -
Lja5g0272 194 PANTHER F16F4.1 PROTEIN-RELATED 11 194 IPR039607 -
Lja5g0272 194 PANTHER VQ MOTIF-CONTAINING PROTEIN 8, CHLOROPLASTIC 11 194 IPR039833 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0272 Lja-Chr5 2410381 2411430 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0272 5 2410381 2411430 Lja5g0272 5 2410381 2411430 ECH