Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0270 ATGGAGCTATCGTTGACCCTCAGATCACAATCACAGTGTCTTTCTTTTTCTTCTCCATTTCCACGCACAATACCCATTTCACCAAAACTCAACAAACCCACCTCACTCACGGTGAGGGCCAAGAAAAAACCATCATCCATTGAAGGTGTCAGCGATGAGTTGAACGCCATCGCTTCTCAGAACCTGGACTTCGCACCCTCCCGGAGAAGGGTCCGAGAAGCCTTCACTGAGGTGCATCAGCAACTTGATCATTACTTATTCAAGAATGCTCCTGCTGGGATCAGAACTGAAGAATGGTACGAAAGGAATTCGAGGGGGTTGGAAATTTTCTGCAAAAGCTGGATGCCAGAGCCTGGAGTTCCTATCAAGGGGGCTTTGTGTTTCTGCCATGGGTATGGGGGTACTTGCACTTTCTTCTTTGAAGGTATTGCCAAGCAATTTGCTGCTTCTGGATATGGTGTTTATGCTATGGACTTTCCCGGTTTTGGTCTATCTGAAGGATTGCATGGTTACATACCGAATTTCGATGATTTGGTCGATGACGTTATAGAACAATATACAAAAATTAAGGCAAGGCCTGAGGTGAGAGAGTTACCTCGATTTATAATGGGGCAGTCAATGGGGGGAGCAATTGCTCTTAAAGTTCATTTGAAGGAACCAAGTGATTGGGATGGAGTTATCCTTGTAGCACCAATGTGTAAAATTGCAGATGAAATGCTACCATCAACTACAACTTTGAAGGTATTAAATCTTTTGTCTAAAGTGACACCAAAGGCAAAACTCTTCCCATACAAAGATCTAAATGAGTTCATTTTCCGGGAACCTGGCAAGAGAAAATTGGCCGTTTACAATGTTATTTCTTATGATGATAAAACGCGATTGAAAACTGGGATGGAACTCTTAAGTGCCACACAAGATATTGAGTCACAATTACAGAAGGTTTCAGCTCCATTATTGATTCTTCATGGAGCAGAAGATAAGGTGACAGACCCATTAGTGAGCCAATTTCTATATGAGAAAGCGTCTAGCAAGGATAAGACACTGAAGATTTATGAAGAAGGTTACCATGGCATTATGGAAGGGGAACCTGATGATAGAATTTTTGCTGTACATAATGACATTATCTCATGGCTTGATTTTAGGTGCTTGTTAATTAATTAA 1161 0.4169 MELSLTLRSQSQCLSFSSPFPRTIPISPKLNKPTSLTVRAKKKPSSIEGVSDELNAIASQNLDFAPSRRRVREAFTEVHQQLDHYLFKNAPAGIRTEEWYERNSRGLEIFCKSWMPEPGVPIKGALCFCHGYGGTCTFFFEGIAKQFAASGYGVYAMDFPGFGLSEGLHGYIPNFDDLVDDVIEQYTKIKARPEVRELPRFIMGQSMGGAIALKVHLKEPSDWDGVILVAPMCKIADEMLPSTTTLKVLNLLSKVTPKAKLFPYKDLNEFIFREPGKRKLAVYNVISYDDKTRLKTGMELLSATQDIESQLQKVSAPLLILHGAEDKVTDPLVSQFLYEKASSKDKTLKIYEEGYHGIMEGEPDDRIFAVHNDIISWLDFRCLLIN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0270 386 Gene3D alpha/beta hydrolase 91 382 IPR029058 -
Lja5g0270 386 PRINTS Alpha/beta hydrolase fold signature 151 166 IPR000073 -
Lja5g0270 386 PRINTS Alpha/beta hydrolase fold signature 202 215 IPR000073 -
Lja5g0270 386 PRINTS Alpha/beta hydrolase fold signature 318 332 IPR000073 -
Lja5g0270 386 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 37 383 - -
Lja5g0270 386 SUPERFAMILY alpha/beta-Hydrolases 78 379 IPR029058 -
Lja5g0270 386 Pfam Serine aminopeptidase, S33 122 363 IPR022742 -
Lja5g0270 386 PANTHER PHOSPHOLIPASE-RELATED 37 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0270 Lja-Chr5 2386831 2390344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0270 38 381 Acyl Lipid Metabolism Gene Families AT1G77420 66.570 1.85e-173 487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0270 5 2386831 2390344 Lja5g0270 5 2386831 2390344 ECH