Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0269 ATGTCAATTCTAAATCAACTCTTCAGCAGAGGCGTGTTTTCTACTCGATGCAAAACATGCCTGAATCTGTCGATCTCGCGCATTAAGCTTCTACAAAACAAGAGAGATGTGCAGCTGAAACAAATGCGTAGGGAGATATCACAATTCTTGCAGGCTGGCCAAGAGGCAATTGCTAGAATTCGTGTGGAGCATATCATACGAGAACAAAATATCTGGGCTGCGTACGAAATATTGGAGTTATTCTGTGAATTTGTTCTTGCACGTGTACCTATAATTGAGAGCCAGAAGGAATGCCCCTCAGAATTGCGAGAAGCCATTGCAAGTATAATTTTTGCTGCTCCTAGATGTTCAGATATACCAGACTTATTACACATCAAAAACTTGTTTACCACCAAGTATGGAAAAGAATTTGTGACTGCAGTATCTGAACTTCGTCCTGATTCAGGCGTGAACCGCACGATTATTGAAAAGCTTTCAGTTAGTGCCCCATCTGGAGAGGTAAAACTCAAGGTCTTGAAGGAGATTGCGAAAGAATACAATCTAGCTTGGGATTCTTCTAAAACTGAGGCTGAATTTAGGAAAAATCATGAAGATCTCCTGGGTGGAACAAAACAAGTTGGAGTTGGGGCTGCACCTTCTCGTACTCCCAGCAAAAAGGGTTCTGATTATTCCTCACCGAGTACTATGGAACATTCTATCAAATCTAACCATGACAAACAAGAACATAAACACCTTGAAGCTCCCATCCCTTCTAACAATAATTCATGGTTAAATACCAATGAAATTGAAGAGTCACACAAGAACAACGGTGTCCCCGTTAGAGATGCTAAGAGTGAGACCAAACTACCATCCTCTGATGTATTAGAGAAGGCCCGAGCTGCCATTGCTTCTGCTGATCGTGCAACTGCAGCTGCTCGTGCTGCTGCTGCGCTAGTACACAGTAATTTTGGATCATTGAAGCGGGACAATTAA 972 0.4228 MSILNQLFSRGVFSTRCKTCLNLSISRIKLLQNKRDVQLKQMRREISQFLQAGQEAIARIRVEHIIREQNIWAAYEILELFCEFVLARVPIIESQKECPSELREAIASIIFAAPRCSDIPDLLHIKNLFTTKYGKEFVTAVSELRPDSGVNRTIIEKLSVSAPSGEVKLKVLKEIAKEYNLAWDSSKTEAEFRKNHEDLLGGTKQVGVGAAPSRTPSKKGSDYSSPSTMEHSIKSNHDKQEHKHLEAPIPSNNNSWLNTNEIEESHKNNGVPVRDAKSETKLPSSDVLEKARAAIASADRATAAARAAAALVHSNFGSLKRDN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0269 323 MobiDBLite consensus disorder prediction 198 286 - -
Lja5g0269 323 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Lja5g0269 323 MobiDBLite consensus disorder prediction 232 246 - -
Lja5g0269 323 Gene3D - 5 192 IPR042277 -
Lja5g0269 323 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 15 321 - -
Lja5g0269 323 MobiDBLite consensus disorder prediction 217 231 - -
Lja5g0269 323 PANTHER IST1 FAMILY MEMBER 15 321 IPR005061 GO:0015031
Lja5g0269 323 MobiDBLite consensus disorder prediction 247 266 - -
Lja5g0269 323 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0269 Lja-Chr5 2382063 2386173 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0269 5 2382063 2386173 Lja5g0269 5 2382063 2386173 ECH