Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0265 ATGGTCACTGCTTCTCTGCTACCTGTGTCATCATGGTTACCACCTCCTCTACCTTCTCCTTTCAAGGGAACACTGAAAACCTTGGAGGCAAGGCCATGTCTGAAGATTCAGCGACCAAGACCCCGTGTTTTCGTTGTTACTTCTGCGGCGGCTCCGGTTAGCGTGAGTGCACCCAATGTCGGTGTCCGGTTTCGCCTTGACAATTTGGGACCTCAACCTGGTTCAAGGAAGAAGGCCAAGAGAAAGGGTAGAGGTATATCAGCTGGGCAAGGAGCTAGTTGCGGTTTTGGAATGAGGGGTCAGAAATCTCGGTCTGGTCCTGGTGTTAGAAGAGGTTTCGAAGGTGGTCAGATGCCGCTGTATCGACGAATCCCTAAACTTAGAGGAATTGCAGGAGGTATGAGTGCGGGATTGCCGAAATATGTCCATGTAAATCTGAGGGACATAGAAGGTGCTAAATTTCAGGATGGGGACGAGGTGTCCTTAGAGTCACTGAAGGAGAAGGGTGTGATTAACCCATCAGGAAGAGAAAGGAGACTTCCTTTGAAGATTTTGGGTGAAGGAGAACTAAGTAAGAAGTTGACAGTAAAAGCCCGCGCCTTTTCCACATCAGCAAAGGAGAAGCTTGAGAGCATTGGATGTTCCCTCACTGTGCTTCCTGGCCGCAAGAAATGGGTTAAGCCATCAGTTGCTAAGAACATTGCACGTGCTGACGAATACTTTGCCAAGAAGCGAGCTGCAGCTGCAGCTGCTGAACCTGCCTCCGCTTGA 771 0.4981 MVTASLLPVSSWLPPPLPSPFKGTLKTLEARPCLKIQRPRPRVFVVTSAAAPVSVSAPNVGVRFRLDNLGPQPGSRKKAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRRGFEGGQMPLYRRIPKLRGIAGGMSAGLPKYVHVNLRDIEGAKFQDGDEVSLESLKEKGVINPSGRERRLPLKILGEGELSKKLTVKARAFSTSAKEKLESIGCSLTVLPGRKKWVKPSVAKNIARADEYFAKKRAAAAAAEPASA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0265 256 MobiDBLite consensus disorder prediction 66 114 - -
Lja5g0265 256 Hamap 50S ribosomal protein L15 [rplO]. 66 219 IPR030878 GO:0003735|GO:0006412|GO:0015934
Lja5g0265 256 SUPERFAMILY Ribosomal proteins L15p and L18e 67 218 IPR036227 -
Lja5g0265 256 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 90 216 IPR021131 -
Lja5g0265 256 TIGRFAM rplO_bact: ribosomal protein uL15 66 216 IPR005749 GO:0003735|GO:0006412|GO:0015934
Lja5g0265 256 PANTHER BNAA06G33230D PROTEIN 21 254 - -
Lja5g0265 256 PANTHER 50S RIBOSOMAL PROTEIN L15 21 254 IPR005749 GO:0003735|GO:0006412|GO:0015934
Lja5g0265 256 ProSitePatterns Ribosomal protein L15 signature. 183 213 IPR001196 GO:0003735|GO:0005840|GO:0006412
Lja5g0265 256 Gene3D - 141 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0265 Lja-Chr5 2341491 2344508 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0265 5 2341491 2344508 Lja5g0265 5 2341491 2344508 ECH