Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0256 ATGGGTTCTCCTAATCCTTTAGCTTCTCTTTGTTTCTTTTCACTTCTTCTAACTTGCTTTCTGTGTGTGGCTGAAGAAGCTAACTCTTCTTCTCCCAAGGCAAACAAAATTGGCCAAGGCTACCGTTTGATATCTATTGAAGATGCCCCTGATGGTTCCATCATGGGGATTCTCCAAGTTAAGGAGAAGAACAATATCTATGGTCCTGACATTCCCCTTTTACGATTCTATGTCAAGCACGAAACTGATAATCGTTTGCGGGTATACATCAGTGATGCAAAGAGTCAAAGGTGGGAGGTTCCTTATGATCTTTTGCCAAGGGAGAAACCACCTGCTTTGAAGCAGAACATTAAGAGGTTGAGGAAGAATCAAATATCAGTGTCAGAGTACTCTGGCTCTGAGCTTGTCTTCAGTTACACTACAGACCCGTTTAGCTTTGCAGTGAAAAGGAAGTCCAATGGAGATACCCTTTTTAATTCCAGCTCTGATGAATCAGACCCATTTGGCCCATTGGTTTTCAAGGACCAGTACCTGGAAATTTCTACCAAGTTGCCCAAAGAAGCCTCCTTGTATGGTTTGGGGGAAAACACACAACCAAATGGGATCAAACTGAATCCAAATGACCCTTACACTTTGTATACCACTGATGTATCGGCCATTTATCTCAATACTGATCTATATGGGTCACACCCTGTGTACATGGATCTCAGAAATGAAGGTGGCAAAGCTTATGCACATGGTGTTCTGCTGCTGAATAGCAATGGAATGGATGTGTTCTACAGAGGAACCTCTCTGACATACAAGGTTATTGGTGGTGTGCTTGATTTTTACTTCTTTGCAGGACCCACCCCTTTGAATGTTGTTGATCAGTACACTTCCTTAATTGGCAGACCTGCTCCAATGCCTTACTGGGCTTTCGGATTCCACCAGTGCAGATGGGGCTATCATAACCTCTCTGTTATTGAAGATGTTGTTGAGAATTACAACAAGGCTAAAATTCCACTTGATGTGATCTGGAATGATGATGATCACATGGATGGGAAAAAGGACTTCACACTCAATCCAGTTAACTACCCTCGTCCGAAGCTTTTAAACTTTCTGGAGAGAATACATGGCATTGGCATGAAATATATAGTCATCGTTGATCCCGGAATTGCAGTTAACTCCAGTTATGGTGTATATCAGAGGGGCATGGCTAATGATGTTTTCATCAAGCATGAGGGTGAGCCCTTCTTGGGTCAAGTTTGGCCAGGAGCAGTTTACTTTCCTGATTTTCTCAATCCAAGCACAGTTTCTTGGTGGGGTGATGAGATCCGCCGCTTTCATGAACTTGTTCCTGTTGATGGCCTATGGATTGACATGAATGAAGTTTCAAATTTCTGCACTGGGAAGTGCACAATTCCTGAGGGTAAGGTGTGCCCAAGTGGAACAGGACCTGGATGGATATGTTGCTTAGATTGTAAAAATATTACAAGCACACGGTGGGATGAACCTCCCTACAAAATTAATGCTTCAGGAGTACAGGCACCTATAGGCTTTAAAACTATAGCCACTAGTGCAGTTCACTATAATGGTGTTTTGGAGTATGATGCTCACAGTATTTATGGCTTTTCTCAAACCATTGCAACTCACAAGGGCCTTCAAGGGATTCAAGGAAAACGACCTTTTATATTGACCCGCTCCACTTATGTGGGTTCAGGCAAATATGCTGCACATTGGACTGGTGACAATAAGGGCACATGGGAGGATTTGAGATACTCAATATCTACAGTGCTCAATTTTGGAATATTTGGGGTGCCAATGGTTGGTTCTGATATATGTGGTTTCTATCCGGCACCCACTGAAGAGCTTTGCAATCGGTGGATTGAAGTTGGTGCTTTCTACCCTTTCTCAAGGGACCATGCAAACTACTACTCCCCTAGACAAGAGCTTTACCAATGGGAGTCAGTAGCAGAGTCTGCTAGAAATGCATTGGGGATGAGGTACAAGCTTCTCCCTTATTTCTACACCTTGAACTATGAGGCTCATACTAGTGGAGTACCAATTGCCAGGCCACTTTTCTTCTCATTTCCAACTTACACTGAATGTTATGGCCTCAGCACCCAGTTCTTGCTTGGGAGCAGCCTAATGATTTCTCCTGTACTTGAGCAAGGAAAGACACAAGTTAAGGCACTCTTTCCTCCAGGAACCTGGTACAGTTTGTTTGACTTAACACAAGCCCTTATTTCAAAAGATGGAGCCTATGTTACCCTTGACGCGCCGCTCAACGTGGTCAATGTGCATTTGTATCAGAACACCATTCTTCCGATGCAACAGGGTGGATTGATAGCCAAGGATGCTAGAATGACACCCTTCAGCCTCATTGTGACCTTTCCAGCTGATTCAACTGAAGGAGAAGCTACAGGGATCCTATTCCTTGATGATGACGAGCTTCCAGAAATGAAGCTTGGAAATGGTTATTCAACCTACATTGATTTCTACGCAAATGCCAAAGAAGGAACTGTGAAAGTTTGGTCAGAAGTCCAAGAGGGCAAGTTTGCTCTAGATAAAGGTTGGGTTATTGACACCATAAGTGTACTGGGATTAAATGGAAATGGGACACTACCTACAATTGAGATAGATGGAGAACCACCAAGGGGTGTCTCAAATGTGACAATTGCCACATATGAACAGAAGTACTTGCACGGTCTAGGAGACGGAGAAAAGAAGTTAGTGATGGTAGGGTTGAAGGGCTTGAATATCCCTATAGGTAAAAACTTTGCTATGACCTGGAAGATGGGATCATAA 2787 0.4331 MGSPNPLASLCFFSLLLTCFLCVAEEANSSSPKANKIGQGYRLISIEDAPDGSIMGILQVKEKNNIYGPDIPLLRFYVKHETDNRLRVYISDAKSQRWEVPYDLLPREKPPALKQNIKRLRKNQISVSEYSGSELVFSYTTDPFSFAVKRKSNGDTLFNSSSDESDPFGPLVFKDQYLEISTKLPKEASLYGLGENTQPNGIKLNPNDPYTLYTTDVSAIYLNTDLYGSHPVYMDLRNEGGKAYAHGVLLLNSNGMDVFYRGTSLTYKVIGGVLDFYFFAGPTPLNVVDQYTSLIGRPAPMPYWAFGFHQCRWGYHNLSVIEDVVENYNKAKIPLDVIWNDDDHMDGKKDFTLNPVNYPRPKLLNFLERIHGIGMKYIVIVDPGIAVNSSYGVYQRGMANDVFIKHEGEPFLGQVWPGAVYFPDFLNPSTVSWWGDEIRRFHELVPVDGLWIDMNEVSNFCTGKCTIPEGKVCPSGTGPGWICCLDCKNITSTRWDEPPYKINASGVQAPIGFKTIATSAVHYNGVLEYDAHSIYGFSQTIATHKGLQGIQGKRPFILTRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTVLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPYFYTLNYEAHTSGVPIARPLFFSFPTYTECYGLSTQFLLGSSLMISPVLEQGKTQVKALFPPGTWYSLFDLTQALISKDGAYVTLDAPLNVVNVHLYQNTILPMQQGGLIAKDARMTPFSLIVTFPADSTEGEATGILFLDDDELPEMKLGNGYSTYIDFYANAKEGTVKVWSEVQEGKFALDKGWVIDTISVLGLNGNGTLPTIEIDGEPPRGVSNVTIATYEQKYLHGLGDGEKKLVMVGLKGLNIPIGKNFAMTWKMGS* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0256 928 PANTHER ALPHA-GLUCOSIDASE 3 927 - -
Lja5g0256 928 Gene3D Glycosidases 298 663 - -
Lja5g0256 928 ProSitePatterns Glycosyl hydrolases family 31 active site. 449 456 IPR030458 -
Lja5g0256 928 SUPERFAMILY Galactose mutarotase-like 40 284 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lja5g0256 928 SUPERFAMILY Glycosyl hydrolase domain 681 761 - -
Lja5g0256 928 Gene3D glycosyl hydrolase (family 31) 34 297 - -
Lja5g0256 928 Pfam Galactose mutarotase-like 189 256 IPR025887 -
Lja5g0256 928 Pfam Glycosyl hydrolases family 31 277 768 IPR000322 GO:0004553|GO:0005975
Lja5g0256 928 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 57 186 IPR031727 -
Lja5g0256 928 CDD GH31_N 178 296 - -
Lja5g0256 928 PANTHER ALPHA-GLUCOSIDASE 3 927 - -
Lja5g0256 928 CDD GH31_MGAM_SI_GAA 296 676 - -
Lja5g0256 928 SUPERFAMILY (Trans)glycosidases 287 679 IPR017853 -
Lja5g0256 928 Gene3D - 766 928 IPR013780 -
Lja5g0256 928 Gene3D - 664 763 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0256 Lja-Chr5 2249093 2253145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0256 37 927 Glycoside Hydrolase AT1G68560 76.457 0.0 1456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0256 5 2249093 2253145 Lja5g0256 5 2249093 2253145 ECH