Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0248 ATGTCAATGAGGGTAGGCTCCTTCAGGCACAGTTTCCTTGAGAAGAGCAAAGAGAGGCTCCTCAAGAGGGAATACCCAGAATTCTCCGACGAAAATGGCGGCTCCGGCAACCGCTCCATGCTCGACGCGCTCTCTGATCACGTCGCTCGCCTTCGCGACGGGTTGCGAGAGTTTGTCAAGAAGTTGTATGAGATGGGTCGCGCTGATCGACGTAAAGTGGTGTTCGCCATGAAAGCTGGGTTGTCATTGGCCATTGTCTCGCTTTTCATATACATTAAGGAGGAACAGCTTAGCAAGTATTCAATCTGGGCCATTCTCACTGTTGTTGTTGTTTTTGAATTCAGCATAGGTGCAACCCTTAGCAAAGGATTCAATCGAGCTTTGGGAACAGTTTCTGCTGGAGTTCTTGCTCTGGGTATAGCGCGATTATCGGTATCGGTTGGTGGAGCTTTTGAGGAACTTATTACTGTGGTAGCTATTTTTATTGCAGGGTTTCTTGCAAGCTTTGTGAAGCTGTATCCTGTGATGAAGCAATATGAATATGGCTTTCGAGTATTCTTGTTAACATTTTGCATTGTATTGGTTTCTGGGAGGCATGGAATGCAGTTTTTCAACACTGCTTTTTACAGATTGATTCTCATTGGTGTTGGTGCTGGTGTAAGTTTATCTGTGAACATTTGCATCTACCCCATCTGGTCTGGGGAGGATCTGCACAAATTGGTGGTGAAAAATTTCCATGGAGTTGCTACATCTTTAGAAGGTTGTGTAACTGGGTACCTGCAATGTGTTGAATATGAGAGGATCCCATCCAAAATTCTTGTGTATCAAGCCTCTGATGATCCTGTTTATAGCGGGTATAGAACAGCAGTGCAGTCGTCAAGCCAAGAGGAAACTTTGCTAGATTTTGCACTATGGGAGCCACCTCATGGTCCATACAAGATGTTCAAATATCCTTGGAGAAGCTACACCAAAGTTAGTGGATCACTGAGGCATTGTGCTCTCACAGTCATGGCATTGCATGGATGCATACTTTCAGAAATACAGGCTCCTCCGGAGAAGAGGCTGGTTTTCTTTGAAGAACTTCAGAAGGTTGGTGCTGAAGGAGCTAAAGTATTACGCCTACTCGGTAGTAAAATGGAAAAGATGGAAAAGCTAAGCAATATCGACATTCTCCTCGAAGTTCATGAGGCAGCTGAGCTATTGCAGATGAAGATTGACAGACAATCATTCCTCCTAGTCAATCCAGAGTGCTGGAAAGCTTTAAGACAGCCTAAGGAAAAAGAACAACCTGACAATTCAATTGATCCTAAAGACAATGAGAACAAAGAGTCGCTGACCACTTCCGTTAGTGAATCAGCAGCTGATTCAAAACTTAATATAACCATAGAGCCTTCTATACCAGAATCTAGTTTTCCACAGACCATGAACAAGAGCTTAGTGTCATGGCCACACCTTTCTTTTTACACAGATGCTATAATGAATGAGGCAGAATCTAAAGTATATGAAAGTGCAAGCTCCTTGTCTTTGGCAACATTTGCATCACTCTTAATCGAGTTTGCAGCGAGGCTTCAACATCTTGTGGATGAATATCAAGATCTTAGTGAGAAGGCAAAATTTAAAGATCCCTTTGAACAACCAGTGCTGAAGTAA 1650 0.4333 MSMRVGSFRHSFLEKSKERLLKREYPEFSDENGGSGNRSMLDALSDHVARLRDGLREFVKKLYEMGRADRRKVVFAMKAGLSLAIVSLFIYIKEEQLSKYSIWAILTVVVVFEFSIGATLSKGFNRALGTVSAGVLALGIARLSVSVGGAFEELITVVAIFIAGFLASFVKLYPVMKQYEYGFRVFLLTFCIVLVSGRHGMQFFNTAFYRLILIGVGAGVSLSVNICIYPIWSGEDLHKLVVKNFHGVATSLEGCVTGYLQCVEYERIPSKILVYQASDDPVYSGYRTAVQSSSQEETLLDFALWEPPHGPYKMFKYPWRSYTKVSGSLRHCALTVMALHGCILSEIQAPPEKRLVFFEELQKVGAEGAKVLRLLGSKMEKMEKLSNIDILLEVHEAAELLQMKIDRQSFLLVNPECWKALRQPKEKEQPDNSIDPKDNENKESLTTSVSESAADSKLNITIEPSIPESSFPQTMNKSLVSWPHLSFYTDAIMNEAESKVYESASSLSLATFASLLIEFAARLQHLVDEYQDLSEKAKFKDPFEQPVLK* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0248 549 MobiDBLite consensus disorder prediction 423 452 - -
Lja5g0248 549 MobiDBLite consensus disorder prediction 423 444 - -
Lja5g0248 549 Pfam Aluminium activated malate transporter 64 534 IPR020966 GO:0015743
Lja5g0248 549 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 3 546 - -
Lja5g0248 549 Coils Coil 516 536 - -
Lja5g0248 549 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 3 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0248 Lja-Chr5 2179866 2182959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0248 14 541 Miscellaneous Gene Families AT1G25480 59.563 0.0 617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0248 5 2179866 2182959 Lja5g0248 5 2179866 2182959 ECH