Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0243 ATGATGGATTCTCCCTCTTCCTCTTCCTCTGAGTTTGCTTCCATAGCCACAGCCAATCAGAGTCTAGCGAGAAGTCGGAGAAGTGGCGATGGCAGTGGTAGTGAAGTGGCGGTGGTGGAAGAATCGCGGCCGTGGCATGATGTTTTCTGGTTAGGAATATTTGTAATCCATTTGATTGGGCTGGGGTTCCTTCTAGGGGTTCTTGGCCTTAACAGATTTGAGCAAGAGAATAGACTTAACATTGATAAGTACACGTCTCGGTTCTCTGAGAATGAGGCTGGGTTGACGGAGACTTACTGGCCGCTCTATGCCGCTGCTGCTGGGGTTGGGACTGTTCTTGGATGGATTTGGTTGTTGTTGTTGGGTTCCCAGGCTACTCAAATGATGAAGTTTTCTGTCCACATCCTCACCACTTATCTTGCTGTCATCAGTGTTCTGTGTTTCTGGGCTAAGCAGATTTTCTGGGGGGTTGCTTTTGGTATTGGAGCTTCTCTGCAGTTCTTGTATGTCATATCCGTCGTAGACAGACTTCCATTTACAATGTTAGTTCTGCAAAAAGCTGTGAAGATGGTTTGGAGTCTTCCTGAGGTTATGAGAGTGTCATACGCATTTATGCTTGTTGTGCTTTTATGGATGGTGTTATGGTCATTTGGAGCAGCAGGTGTTGTGGCTTCAAGCATGGGTGATGGCGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACAGGCGCAGTACTCTGTAATACTGTACATGTTATAGTGTCTGGGATGGTGTTTCTTGTTCTTCTCCATGGCGGTAGAGAGGCAGCATCGATTCCTGCTAACTCCTTAAAGAAATCTTTACAGTCTTCTTTAACAACATCTTTTGGCAGCATTTGCTATGGCTCGTTATTTACTGCTGCTATTAGGACACTACGGTGGGAGATTCGTGGAATTCGGTCAAAGATTGGCAATAATGAGTGTTTGCTTTGCTTTGTTGATTTCCTTTTCCATCTTGTGGAGACTCTTGTTCGTTTTTTTAACAAGTATGCCTATGTTCAGATTGCTGTTAATGGCAAAAGCTTCAACCATTCCGCTAGAGATGCGTGGGAGTTATTCCAGTCAACTGGAGTTGAAGCTCTTGTGGCCTATGATTGTTCAGGTGCTGTCCTGCTCATGGGCACCATTTTTGGTGGGCTGATAACTGGAACTTGCTCTGGGATTTGGGCATGGGTTAAATGGAGTGACAGAGTTATTATGATTGGGTCCACGTCCATGCTGATGGGGATGGTACTGGTTGGGTTGGCAATGGTAGTGGTGGAAAGTGCTGTTACATCCATATATATCTGCTATGCAGAAGACCCCTTATTGATTCATAGATGGGACGCTGACTTTTTCAACCAGATTTCTGAGACACTGCATGAACGACTTCAATATAGGAGTGCTCGAGGAAGGGAAGTTTTGACCCACTCGCGGCTCCAAGAAAACGCCTCTATTTGA 1491 0.4554 MMDSPSSSSSEFASIATANQSLARSRRSGDGSGSEVAVVEESRPWHDVFWLGIFVIHLIGLGFLLGVLGLNRFEQENRLNIDKYTSRFSENEAGLTETYWPLYAAAAGVGTVLGWIWLLLLGSQATQMMKFSVHILTTYLAVISVLCFWAKQIFWGVAFGIGASLQFLYVISVVDRLPFTMLVLQKAVKMVWSLPEVMRVSYAFMLVVLLWMVLWSFGAAGVVASSMGDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREAASIPANSLKKSLQSSLTTSFGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCFVDFLFHLVETLVRFFNKYAYVQIAVNGKSFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTIFGGLITGTCSGIWAWVKWSDRVIMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIHRWDADFFNQISETLHERLQYRSARGREVLTHSRLQENASI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0243 496 Pfam Plasma-membrane choline transporter 158 452 IPR007603 GO:0022857|GO:0055085
Lja5g0243 496 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 25 489 - -
Lja5g0243 496 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 25 489 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0243 Lja-Chr5 2150036 2153153 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0243 5 2150036 2153153 Lja5g0243 5 2150036 2153153 ECH