Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4206 ATGGAAGGTTTTCACCCATCTATGACTATGGCCTCTCCTTTTCCTTACACATTCCCCATCAGTGCTGGTGGTATTGGTGTTGGTGTTGTTGGTGTTGGTAGTAGCAATCTAACCACCCCCACCCCCACTGCCACTGGAACTTACAACAACACTCCATGGATGAACAGCAGGATATGGAGCAAGCTCCCTCAGAAGCTTCTGGACCGAGTCATTGCCTTCCTCCCTACACCGGCTTTCTTCCGAGCACGCTCCGTCTGCAAGAGATGGTACTCTCTTCTCTTCTCTAACACCTTCCTTGAATTGTACCTCCACCTCTCCCCTCGCCGCCACTGGTTCATCTTCTTCAAGCACAAAACCCGCAAAAACTACATCTACAAAAACAACAACAACAACATTATTACCGGTTCTGCTGGCACTGCCTCCTGTGAAGGATACCTGTTTGACCCCGCTGAGATGGCGTGGTACCGCATCTCCTTTGCTATGATCCCACCAGGATTCTCTCCAGCCTCATCCTCTGCAGGCCTTCTCTGTTGGGCCTCAGATGAGGCTGGCCCAAAAACCATGCTTCTCTCCAACCCTATCCTGGGCTCCTTAACCCAGCTCCCTCCAACTCTAAGGCCAAGGCTCTTCCCTTCCATTGGCCTAACCATCACCCCAACCTGCATAGACGTGACTGTAGCAGGTGATGACATGATATCCCCTTATGCCGTCAAGAACCTCACATCGGAAAGCTTCCACATCGACGGTGGAGGCTTTTACTCGATGTGGGGCACGACCTCCCCGCTTCCAAGGCTCTGCAGCCTTGAAAGCGGTAGGATGGTGTGTGCTGAGGGGAAATTCTACTGCATGAACTGCAGCCCTTTTAGTGTTTTAGCCTATGACATTGCATCCACCACTTGGTTCAAGATTCAAGCTCCTATGAGGAGGTTTTTAAGGTCTCCTAACCTGGTTGAGTGTAGGGAGAAGCTGATGCTGGTTGCGGCGGTTGAGAAGAGCAAGCTGAATGTTCCAAGGAGTTTGAGGGTGTGGACGTTGCAGGCTTGTGGGACCATGTGGGTGGAATCTGAGAGGATGCCGCAGCAGCTTTACATTCAGTTTGCTGAGATTGAAGGTGGAAATGGGTTTGAATGTGTAGGGCATGGTGAGTTTGTGGTGATCATGATCAAAGGGACAGATAAGGCGTTGCTGTATGATTTGGTGAGGAAGAGGTGGCAGTGGATTCCGCCGTGTCCTTATGCTGGTTATGATGGGTTTGAGTTGCATGGTTTTGCTTATGAGCCTAGATTGGCTACTCCTGTTACTGCACTTCTTGATCAGTTGGCACTTCCTTTTCAGAGTTACAATGCTTAG 1350 0.5037 MEGFHPSMTMASPFPYTFPISAGGIGVGVVGVGSSNLTTPTPTATGTYNNTPWMNSRIWSKLPQKLLDRVIAFLPTPAFFRARSVCKRWYSLLFSNTFLELYLHLSPRRHWFIFFKHKTRKNYIYKNNNNNIITGSAGTASCEGYLFDPAEMAWYRISFAMIPPGFSPASSSAGLLCWASDEAGPKTMLLSNPILGSLTQLPPTLRPRLFPSIGLTITPTCIDVTVAGDDMISPYAVKNLTSESFHIDGGGFYSMWGTTSPLPRLCSLESGRMVCAEGKFYCMNCSPFSVLAYDIASTTWFKIQAPMRRFLRSPNLVECREKLMLVAAVEKSKLNVPRSLRVWTLQACGTMWVESERMPQQLYIQFAEIEGGNGFECVGHGEFVVIMIKGTDKALLYDLVRKRWQWIPPCPYAGYDGFELHGFAYEPRLATPVTALLDQLALPFQSYNA* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4206 449 Gene3D - 54 99 - -
Lja4g4206 449 ProSiteProfiles F-box domain profile. 56 105 IPR001810 GO:0005515
Lja4g4206 449 PANTHER PROTEIN UNUSUAL FLORAL ORGANS 59 430 - -
Lja4g4206 449 SUPERFAMILY Galactose oxidase, central domain 85 415 IPR011043 -
Lja4g4206 449 PANTHER F-BOX/KELCH-REPEAT PROTEIN 59 430 - -
Lja4g4206 449 SUPERFAMILY F-box domain 52 132 IPR036047 GO:0005515
Lja4g4206 449 Pfam F-box domain 59 93 IPR001810 GO:0005515
Lja4g4206 449 SMART fbox_2 62 102 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4206 Lja-Chr4 75514076 75515425 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4206 4 75514076 75515425 Lja4g4206 4 75514076 75515425 ECH