Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4202 ATGCAAATATCTTCTGAAAATTCAGTGTCAAGTATGAGATTCTCAGTGGTGTGTTTTGTCTTACTATTATTGGTGGTAGTTGAGGCAGCTACAAGTTTCAGTTTCACCAACAGAGAGAAGAAGCTACATGAATTCAAGCACAAACTTGAGCAAAAGCTAATTACTAGTACTCCTTTAGCATCACCACCTGCTTCTTCAGAAACAAAATTGAGGGGAAGGGTGTTGTACTTGAGTGAATATGGTGCGGACCCAACAGGATCAGAAGAGAGCAGTGATGCCATTTTGAAAGCTGTGGAGGATGCATTTGAGTTGCAGAAGAAGGGTACTCTTGAAATGGTAGCAGGGTTGAATGACTTGGGAGGTGTTGTGATTGATTTGCAAGGTGGAAACTACAGAATCAGCAAACCCATTACTTTCCCTTCATCTGGGGGTGCCAATGTTCTGGTGCAAGGAGGAACCTTGAGAGCGTCTGATACTTTTCCTGGTGACCGGCATCTAGTTGAGCTATGGTCATCAAATTCCAAGAAACTTGATAGAACAGAATCTCCCCAAGATGATGAAGGACTAAACGACATGAAGGCCCAAAACAATGCAATTTACTACGAAGACATAACCTTCAGGGACATCCTCTTCGATTCAAGCTACAGAGGAGGAGGGCTTTTCATAATCGATTCTGCCAGAATCCGAATCAACAACTGCTTCTTTCTGCATTTCGCCACAGAAGGAATTCTGGTCCAGCAAGGACACGAAACCTTCATATCAAGTTGTTTTCTCGGGCAACATCCGACCATTGGCGGCGACAAAGGTGAGAGGGATTTCTCAGGGGTTGCAATTGATCTTGCTAGTAATGACAATGCAGTCACAGATGTTGCAATTTTCTCAGCAGCAATTGGTGTTGTGTTGAGGGGCCAAGCTAACATTCTAACAGGAGTGCACTGTTATAACAAAGCTACATATTTTGGTGGCGTTGGAATCTTAGTGAAATTGCCAGGGAATTCACAAACTAGAATTGATAACTGTTATCTTGATTACACTGGTATAGTCATGGAAGACCCTGTTCAAGTTCATGTCACTAATGGGCTATTTCTAGGGGATGCTAATGTTTTAGTGAAATCTGTGAAGGGTCAAGTTTTGGGGTTAAACATTGTGGGTAATATGTTTAGTGGTGATCCTAATAAGAAGGTTCCAATTGTGAAGCTTGATGGGGAGTTTAGTAACATTGATCAAGTGGTGATTGATAGAAACAATGTGAATGGCATGGGGTTGAGATCAACCGTTGGAAAGTTAACTGTGAGTGGAAATGGGACAAAGTGGGTGGCTGATTTTTCATCAGTTTTGGTGTTTCCTAATCGGATTAGTCATTTTCAGTATTCATTCTATGCTCAAGAAGAGCCTAAGTTTTTAGCACACTCTGTGACCAATGTGTCAGATAATGTGGTCATTGTGGAGAGTGAGAAGGAAGCTAAAGGGTTGGTCTCCTTTGTGGTAGAACAATAA 1497 0.4188 MQISSENSVSSMRFSVVCFVLLLLVVVEAATSFSFTNREKKLHEFKHKLEQKLITSTPLASPPASSETKLRGRVLYLSEYGADPTGSEESSDAILKAVEDAFELQKKGTLEMVAGLNDLGGVVIDLQGGNYRISKPITFPSSGGANVLVQGGTLRASDTFPGDRHLVELWSSNSKKLDRTESPQDDEGLNDMKAQNNAIYYEDITFRDILFDSSYRGGGLFIIDSARIRINNCFFLHFATEGILVQQGHETFISSCFLGQHPTIGGDKGERDFSGVAIDLASNDNAVTDVAIFSAAIGVVLRGQANILTGVHCYNKATYFGGVGILVKLPGNSQTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANVLVKSVKGQVLGLNIVGNMFSGDPNKKVPIVKLDGEFSNIDQVVIDRNNVNGMGLRSTVGKLTVSGNGTKWVADFSSVLVFPNRISHFQYSFYAQEEPKFLAHSVTNVSDNVVIVESEKEAKGLVSFVVEQ* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4202 498 Gene3D - 78 491 IPR012334 -
Lja4g4202 498 SUPERFAMILY Pectin lyase-like 73 459 IPR011050 -
Lja4g4202 498 PANTHER POLYGALACTURONASE QRT3 12 498 IPR039279 GO:0004650
Lja4g4202 498 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 12 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4202 Lja-Chr4 75476903 75480103 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4202 4 75476903 75480103 Lja4g4202 4 75476903 75480103 ECH