Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4181 ATGTCCAGAAACTTGATCCTCCGATCCTTCGCTCTCCGCCATGCAATAAGGAACGCCGTTCGCCCATTCCTGAACCGCACCCACCTTCCTTCTTCACTTTCCAATTCCAAAACAACCTCCCTCTTCGCCGCCACCATCGCCTCCACTCTCCTCCCTCCCTTCCACCACTCCCGTTCCCTTTGCTCCGCCCCAGCTAATCCCGGTGTTGTACTCGTTAATTCAGAGGAAGAGTTCAATAGAATCCTCACCAAAATTCAAGATAACTCGTTGCACGCGATCATCTATTTCACTGCAGTTTGGTGTGGACCTTGCAAGTTTATTTCTCCTATAGTTGGGGAGCTCAGTAAGAAGTACCCTCATGTAACAACATATAAGATTGACATTGATCAGGAAGCACTTCGTGGCACATTGACAAAGTTGCAGATTTCGTCTGTGCCAACACTACATTTCTTTCTGAACGGGAAAAAGGCTGATGAGCTTGTAGGCGCTGATGTTGCAAAACTGAACCGTATTACAGAGAAACTCTTCAAGAAGGACTGA 540 0.4741 MSRNLILRSFALRHAIRNAVRPFLNRTHLPSSLSNSKTTSLFAATIASTLLPPFHHSRSLCSAPANPGVVLVNSEEEFNRILTKIQDNSLHAIIYFTAVWCGPCKFISPIVGELSKKYPHVTTYKIDIDQEALRGTLTKLQISSVPTLHFFLNGKKADELVGADVAKLNRITEKLFKKD* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4181 179 Pfam Thioredoxin 70 167 IPR013766 -
Lja4g4181 179 PANTHER THIOREDOXIN O1, MITOCHONDRIAL 1 177 - -
Lja4g4181 179 PRINTS Thioredoxin family signature 92 100 - -
Lja4g4181 179 PRINTS Thioredoxin family signature 100 109 - -
Lja4g4181 179 PRINTS Thioredoxin family signature 141 152 - -
Lja4g4181 179 CDD TRX_family 76 175 - -
Lja4g4181 179 ProSiteProfiles Thioredoxin domain profile. 57 177 IPR013766 -
Lja4g4181 179 Gene3D Glutaredoxin 66 177 - -
Lja4g4181 179 SUPERFAMILY Thioredoxin-like 61 168 IPR036249 -
Lja4g4181 179 PANTHER THIOREDOXIN 1 177 - -
Lja4g4181 179 ProSitePatterns Thioredoxin family active site. 93 111 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4181 Lja-Chr4 75314522 75317688 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4181 4 75314522 75317688 Lja4g4181 4 75314522 75317688 ECH