Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4172 ATGAAGGAAAACAAATCATCAGCACCTAAACTGCTTAACGGGAACTGGGTTACAAAGCGCAAGCGGAGGAAGCTTCTTGTAGGACCGGATCAACCCTCTGGTAAAGAGCAATCCAATGTTAAAGAAGACAATTCAGTAACATCTGAATCTTCTAGGAATGCTTCAACTAAACGTATGATAAAGACTGATGTAGCTACTAAGCATCAATTTTCATCTAAGAAGAGAGGAAATGATGGGTATTTCTTTGAATGCGTGGTTTGTGATAATGGTGGGGACTTATTGTGCTGTGATAGCTGTCCTCGCACTTATCATTTAAAGTGCCTTAACCCTCCTCTTAAGCGCATCCCCACGGGAAAGTGGCAGTGTCCAAGCTGCGTTGAAGGAAATGATCAACTAGCACCCAAAAACCATTTGGATTCATTTTCGAAGCGAGCAAGGACTAAGATTGTCACTGGAAAATCAAAAGGTGGAGATAACTCGCTTAATTTAGAAAAAGTTTCTGCAATTTTTGGAAGCAAACTTATTTCCAAGAAAAGGTCCTCCACCAAAGGAAAATCTCTTTCGTCTATGGGAGTAAACTCAGTAAAGTTCTTTGGGAAAAAACCAATACCTTCCCAAGTAGATGCAACTTGTAGCGACAAGCCTGTTGACCCTTCTCTTGGGAGTTGCGTGGAAGGAGATGCTGATGAAAAGATATCAAACTTGTCTCCATCAGTCTCTCCTAAGGACAGGAAGTCAACTTCACCAGCCAAGGAAGATTCATCTTCGTCCAAATTTAATAATTTAGAAGCAAATGATGAACAGCTAGAGGGGAAGACTGATTTATCATGCAACAAAATTCCTTTAAGAAAAACACTTGTGCTTGCTATTGCTGCTGGTGGAGAGGAAGTGAAAAAAAGGAAGCACAAAGTTGTTGATGACAATGCTGTTCAAAAGAAGCGGAGGACTGAAAAGGGGAAAAAAATTGTTAATACCTCTATAAAGTCCAAGTCAGGAAACAGTAAAGTACAGAAGAAGAAGTCTATGGCACATACCATTTCCACATCCGTATTAAAAAAGGATGTTGGAAACAAGAATTCTGATGTGCAGCAGAAAGATGAGAAGTTGTCTCAGGTAATGAAAGACACATCAAATGAGCTTGATAGAGCAGGAAGTAATGTGGATAAATCTGAGATGCGTGAAGACATTGCAATTGTTGAAGGTCTGCAGGTTGATCGGGTTCTAGGATGTCGAATTCAAGGTGAGAACATGGACTCACTACGACACTTATCTTTGAACATTGTAGATGACTCACCTTCTGGCGATCAGCTAATATCGGAAAACCAGACCAGACAGCTAGAGGATAATTCTCCTTGTGATAATGATTTGGATGTTGAATCAACTGAAAATCTTGTTGATGGTCCTCAAAATGTTAAGAGTTCTGATAAAGAAGGTGAATTGAAAAACACTGACGGAGTGGAAAGAATTCATGTGCACAGAAGATCAATAACAAAGGAAAGCAAGAAAGGAAACCGTGTAGATTCGTTGAGTAAAACCACCGATGGTATAGGTTCCTCTCCTGGGAATGGTAAAGATCAGGATGATACCACTGTATCTGCTGAACCGTTGGAAAAGCCAAATGACAAGATGGACACAGAGGAGAGTATCGATGTCACTTTAAGAAGCGAGAGGAGCAGTGAGCTTCCAAAAAATTGTGAAATACATGTCTCTCTTGAAACAAAACAAAAGGAACTGGATGTGGAGAAGGGAATGAGTAGTAGTGTTCATAATAAAGTTCAGGATGCTAATGTGGTTGAATCTGCATGTCCAAATGAAGAGAAAATTTCCTTTGAGTTTTTAGTTAAGTGGGTAGGAAAATCTCATATTCACAACAGTTGGATTTCTGAATCCCATTTAAAAGCTCTTGCGAAGAGAAAACTTGAAAATTACAAGGCAAAGTATGGGATGGCGATAATAAATATTTGTGAGGAGCGTTGGAAGCATCCTCAGCGGTTGCTCGCTCTTCGTCCTTCCCAACATGGAAGATCTGAGGCATTTGTGAAATGGACTGGATTACCTTATGATGAATGTACTTGGGAAAAAATAGATGAACCTGTGCTTCAAAATTCTTCTCATTTGATTACAATTTTTAAGAAGCTTGAAGCCCTCACGGTGGAAAAGGATGCATCAAAGGAAAATTCTAGAAAACACAATGACCGTCAAAATGATATATGTAATCTTACAGAGCAACCTAAGGAACTAAAAGGTGGTGCTTTGTTTCCCCATCAGCTTGAGGCTCTGAACTGGTTGCGGAAATGCTGGTATAGGTCCAAAAATGTGATACTTGCTGATGAGATGGGGCTTGGGAAAACAGTATCTGCTTGTGCTTTTCTTTCATCATTGTATTTTGAATTCAAAGTTTCACTTCCTTGCTTGGTCCTGGTACCTCTTTCAACAATGCCTAATTGGCTTTCTGAATTTTCACTATGGGCTCCAGATGTGAATGTTGTAGAATATCATGGCAGTGCAAAAGCAAGAGCTATAATTCGCCAGTATGAATGGCATGCAAATGGACCAAGCGGATTGAATAAGAAAACAGAAGCCTATAAATTTAATGTGCTCTTAACTACTTATGAAATGGTTCTTGCCGACTCTTCTCATTTGCGGGGAGTTCCTTGGGAAGTTCTTATTGTTGATGAGGGCCATCGACTGAAGAATTCAGGTAGTAAGCTTTTCAGTTTGCTAAATACATTCTCTTTTCAACACCGTGTTCTGTTGACTGGTACCCCTCTCCAGAACAACCTTGGTGAGATGTACAACTTGCTAAATTTCTTACAGCCGGCTTCATTTCCTTCCTTAACATCATTTGAGGAGAAATTTAATGATCTTGCGACTGCAGAAAAAGTTGATGAGTTGAAAAAACTTGTTGCTCCTCATATGCTTCGCAGACTTAAAAAGGATGCCATGAAAAATATTCCCCCAAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTATCGTGCAATGCTTACAAAAAATTATCAAATATTGCGCAATATCGGTAAAGGGGTTGCCCAACAGTCAATGCTGAACATTGTGATGCAACTGAGGAAGGTCTGCAATCATCCATATCTCATACCAGGAACTGAACCTGATTCTGGATCTGTTGAGTTCCTTCATGAAATGAGAATAAAGGCTTCGGCTAAGTTGACTCTTCTGCATTCTATGCTGAAGATTTTACATAGGGAAGGTCACAGAGTTCTTATTTTCTCGCAAATGACCAAGCTTCTTGACATCCTGGAGGACTATTTGAATATAGAATTTGGGCCTAAAACTTATGAGAGAGTTGATGGCTCTGTTTCTGTAGCTGATCGTCAGACAGCAATTGCACGCTTTAACCAAGACAAAAGTCGATTTGTTTTCTTGTTATCCACCCGTTCTTGTGGACTTGGGATAAATTTGGCAACTGCTGACACTGTTATCATCTATGATTCTGATTTTAACCCTCATGCAGATATCCAAGCAATGAATCGGGCACACAGAATTGGACAATCAAATAGACTTTTGGTATACCGGCTTGTGGTTCGTGCTAGTGTTGAAGAGCGCATCCTGCAGCTTGCTAAGAAGAAATTGATGCTTGATCAACTTTTTGTAAATAAGTCTGGATCTCAAAAAGAAGTAGAAGATATTTTAAAATGGGGAACTGAAGAACTCTTCAATGATTCTCCTGGACTGAATGGTAAAGATATAAGTGAAAATAGTATTAGTAACAAAGATGAGGCAGTAGCAGATATCGAGCACAAGCATCGGAAAAGGACTGGTGGTCTTGGAGATGTATACCAGGATAAGTGTACAGATATCGGCAGCAAGATTTTGTGGGATGAAAATGCTATTTTAAAATTACTTGATCGTTCAAACCTTCAAGATGGTTCAACAGATATTGCTGAAGGGGATTCTGAGAATGATATGCTGGGCTCAGTGAAGGCCATTGAATGGAATGACGAACCAACTGAAGATCATGTAGTGGGTGAATCTCCACCTGATGGGACTGATGATATGTGTCCAAATTCTGAAAAGAAAGAGGATAATGTGGTTATTGGCAATGAAGAAAATGAATGGGACCGACTACTGCGTGTGAGGTGGGAGAAATATCAAAGTGAAGAGGAAGCAGTTCTTGGTCGAGGGAAGCGGCAGAGGAAAACTGTTTCGTACAGGGAAGTATATGCTCCATACCCAAGTGAAGCGATGAATGAGAGTGGCGGCGAGGAGGAAAAAGCACCAGAACCGGAGCCTGAGCGTGAATATACACCAGCAGGACGAGCCTTGAAGGCAAAATTTGCTAAACTCCGTGCTCGGCAGAAGGAACGACTTGCTCAAAGGAATGCGGTTAAAGAATCACATCCTACTGAGGGATTTCCAGTTCCAGGTAGCGAGTCACAAACGCCTCCTCCTGCCATTGCCAAGGGTGGGGGGGATCTAGGAGCTGGACCGGTGCATTCAGTTCCAGAGGGGCCTTCTATAAACTTAAATGACAGCGAATATGCTCAACTTTCAGAAGGTCAGATTAGCAATGCTGACTCCTTACCAAGGATTGACAAGCATCGAAAACACAAAATGAGGGGTCCCGTTGATGTTTCTGTCAATAATCCAGGTCGTTCTCTACCGGAAATTTTCCTTCCAAATCACCATAATAAGGGGAGGCTAAACATGACAAACACTATGCCCACCAACAATCTGTTGCCTGTTCTGGGCCTTTGTGCTCCAAATGCTAACCAAACAGAATCATCAGAACGTAACATTTCGAAGCTAAATTGGAGACAAAATAGACATGGAACCAGACAAGAGTTTCCATTCAACCTTGCCGCTTGTGCCGGGACATCCATGGATGCTGAGGTCAGAAGTAAGGAAACGGCAGCAAACACCAAACTGTCTGATGCATCAACAGAAAACTTACAACAAAATTTCAAAAATTGCATCCTTGATAACAGTCTCCCATTCGTTCCGTTTCCACCCTCTGTGCGAGGAAAGGAATCCGATGCGTTTGAAAGTTCAAGAGCTAGATTTACTGCGTTCCAGGAGAAAATGGCCCTGCCAAACCTGCCATTTGATGAAAGGTTGCTGGGGAGGTTTCCACTCACAACTAAGAGCATGGCAAATTCACATATGGACCTCTTATCTAACTTGTCATTAGGAGGCAGACATGAAGCTTTAAATGCAGCTATGCAAGACCTTCCAACAATGCCAGCATTACCTAATTTCAAAATGCCCCCTGAAGATTTGTTCAGATATAATCAGCAAGACATGGATGTGCCCCCTACTTTAGGTTTGGGACAAAGGCCAACCACATTCTCATCTTTCCCAGAAAACCACAGGAAGGTGCTTGAAAACATAATGATGAGAACTGGATCAGGGTCGAGCAGTTTATTGAAAAAGAAGTCAAAATTAGATGGCTGGTCTGAAGATGAACTTGATTCCCTCTGGATTGGTGTTCGGCGGCATGGAAAAGGTAATTGGGATGCTATGCTTAGAGATCCTAAGTTAAGGTTTTCAAAGCATAAACTATCAGAAGATTTATCAGTGAGGTGGGAAGAGGAACAGGTAAAGGTCTTTCAGGGGCCGCCTTTTCCTGTGCAAAGATCATCCAAGGCGACAAAGTCTACCAAGCCTGCACATTTTCCAATCTCTGATGGAATGATGGAGAGGGCATTGCAAGGGAGCAAATTTCTTTTACCGCCGAAGTTCCAAAACCATCTGACAGACATGAAATTAGGGAGATGTGATTCTCCATCTAGTCTGCCACCCTTCAGAGCATTGGATCGACCTAGTTTGCAAAGTGATCACTTTGCACCTCTTCCATCTTGGAGTTATGATATGAACAGAGCAAAATTCCCTGAAGATGCTCCTGCTGAAACATCTGATAGACCAGGATCTTCAAACAATGTGCCGACTGAAAGGCCATTTCTGCTCAATTCTTTTGGAGCCAGCAGCTTGAGTTCTTTAGGTTTGAATTGCTCAGGTTCCATTGGTACACAGCAAAAGGAGGATGATCAAGGAAGCAGGAAGCGTGGAAAGTTGCCTGTACGTCTGGAGGGAGCAGCCAATGATATGTGCGATGACCGCGTTAATGTAGGCTATGGCGAATCTAGTGGCTCAGGATTGTTATCGAACCCCATTAGACCTGAGCTTGTGCACTCAAAAGGAGAGGAGGCAGCTGGAAGCAGTATGTCAAAAGACAAGCTGCCTCACTGGTTACGACAAGCTGTGACTTCTCCAGCCAAACTTCCTGATCCTGAGCTGCCGCCTACTGTAACGGCCATTGCTCATTCAATTCGTATGCTGTACGGAGAAGATAAGCCCACAATTCCTCCATTTGTGATTCCTGGACCACCACCCTCCCTACCAAAGGATCCCAGGCGTGGTCTCAAGAAGAGAAAGAGAAAGTTAGACAAGCACAAGTTGGTTCTTCCTGACTCTACTGGAACCAGCAAGGACTTCCAAAGCAGCCACCATGTTGATAATGGTGCTTCAAGCTCAACTCCTTTGGCGCCACCGTTTCCTCTACCTCAGACAGGAACTGCAGCACCTCAGCAGATTGAACCAGACCTTAACTTGCCTCCACTAAATTTGGCAAACCCACCACACTCTGCTGTGTACCATTTGAAAAAGGCAAGCTCAGAACTTTCTCCTTCTCCTGAAGTGCTCCAGTTGGTCGCATCGTGCGTTGCGCCTGGCCCGCATCTTCCTTCCGTTCCCAGTTCTTCATGCATAGCTTTTGAGGACATGTTTCCCTTGCCTAGACCTGTTGGCAAAGCTAAATTTAAGGACTCGGAAGGTGCCTATAAAAACATGAAGCCTGGAAAGATTTCACCAGAAATTCGGTGCTCACCTCCAGAGGAGCATCAAGTAGAACAACACCCTGTTAGTGGTGAATCCAGCAAGACTCAGTCGGATTCCTCCCAGGTTGAACGGCCTAATGTAGAGGAGGTTTCATCTGAAGGGACTGTCTCGGATCATGCTGTGAGAGAACAGGAAACAGGCTGTACTCTCTCAGATAAAGATGAATGA 7062 0.4259 MKENKSSAPKLLNGNWVTKRKRRKLLVGPDQPSGKEQSNVKEDNSVTSESSRNASTKRMIKTDVATKHQFSSKKRGNDGYFFECVVCDNGGDLLCCDSCPRTYHLKCLNPPLKRIPTGKWQCPSCVEGNDQLAPKNHLDSFSKRARTKIVTGKSKGGDNSLNLEKVSAIFGSKLISKKRSSTKGKSLSSMGVNSVKFFGKKPIPSQVDATCSDKPVDPSLGSCVEGDADEKISNLSPSVSPKDRKSTSPAKEDSSSSKFNNLEANDEQLEGKTDLSCNKIPLRKTLVLAIAAGGEEVKKRKHKVVDDNAVQKKRRTEKGKKIVNTSIKSKSGNSKVQKKKSMAHTISTSVLKKDVGNKNSDVQQKDEKLSQVMKDTSNELDRAGSNVDKSEMREDIAIVEGLQVDRVLGCRIQGENMDSLRHLSLNIVDDSPSGDQLISENQTRQLEDNSPCDNDLDVESTENLVDGPQNVKSSDKEGELKNTDGVERIHVHRRSITKESKKGNRVDSLSKTTDGIGSSPGNGKDQDDTTVSAEPLEKPNDKMDTEESIDVTLRSERSSELPKNCEIHVSLETKQKELDVEKGMSSSVHNKVQDANVVESACPNEEKISFEFLVKWVGKSHIHNSWISESHLKALAKRKLENYKAKYGMAIINICEERWKHPQRLLALRPSQHGRSEAFVKWTGLPYDECTWEKIDEPVLQNSSHLITIFKKLEALTVEKDASKENSRKHNDRQNDICNLTEQPKELKGGALFPHQLEALNWLRKCWYRSKNVILADEMGLGKTVSACAFLSSLYFEFKVSLPCLVLVPLSTMPNWLSEFSLWAPDVNVVEYHGSAKARAIIRQYEWHANGPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLTSFEEKFNDLATAEKVDELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLNIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDISENSISNKDEAVADIEHKHRKRTGGLGDVYQDKCTDIGSKILWDENAILKLLDRSNLQDGSTDIAEGDSENDMLGSVKAIEWNDEPTEDHVVGESPPDGTDDMCPNSEKKEDNVVIGNEENEWDRLLRVRWEKYQSEEEAVLGRGKRQRKTVSYREVYAPYPSEAMNESGGEEEKAPEPEPEREYTPAGRALKAKFAKLRARQKERLAQRNAVKESHPTEGFPVPGSESQTPPPAIAKGGGDLGAGPVHSVPEGPSINLNDSEYAQLSEGQISNADSLPRIDKHRKHKMRGPVDVSVNNPGRSLPEIFLPNHHNKGRLNMTNTMPTNNLLPVLGLCAPNANQTESSERNISKLNWRQNRHGTRQEFPFNLAACAGTSMDAEVRSKETAANTKLSDASTENLQQNFKNCILDNSLPFVPFPPSVRGKESDAFESSRARFTAFQEKMALPNLPFDERLLGRFPLTTKSMANSHMDLLSNLSLGGRHEALNAAMQDLPTMPALPNFKMPPEDLFRYNQQDMDVPPTLGLGQRPTTFSSFPENHRKVLENIMMRTGSGSSSLLKKKSKLDGWSEDELDSLWIGVRRHGKGNWDAMLRDPKLRFSKHKLSEDLSVRWEEEQVKVFQGPPFPVQRSSKATKSTKPAHFPISDGMMERALQGSKFLLPPKFQNHLTDMKLGRCDSPSSLPPFRALDRPSLQSDHFAPLPSWSYDMNRAKFPEDAPAETSDRPGSSNNVPTERPFLLNSFGASSLSSLGLNCSGSIGTQQKEDDQGSRKRGKLPVRLEGAANDMCDDRVNVGYGESSGSGLLSNPIRPELVHSKGEEAAGSSMSKDKLPHWLRQAVTSPAKLPDPELPPTVTAIAHSIRMLYGEDKPTIPPFVIPGPPPSLPKDPRRGLKKRKRKLDKHKLVLPDSTGTSKDFQSSHHVDNGASSSTPLAPPFPLPQTGTAAPQQIEPDLNLPPLNLANPPHSAVYHLKKASSELSPSPEVLQLVASCVAPGPHLPSVPSSSCIAFEDMFPLPRPVGKAKFKDSEGAYKNMKPGKISPEIRCSPPEEHQVEQHPVSGESSKTQSDSSQVERPNVEEVSSEGTVSDHAVREQETGCTLSDKDE* 2354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4172 2353 Gene3D - 986 1213 IPR027417 -
Lja4g4172 2353 ProSiteProfiles Zinc finger PHD-type profile. 81 128 IPR019787 -
Lja4g4172 2353 CDD SF2_C_SNF 1066 1193 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 2005 2024 - -
Lja4g4172 2353 SMART ultradead3 748 952 IPR014001 -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 1417 1438 - -
Lja4g4172 2353 Pfam Helicase conserved C-terminal domain 1071 1182 IPR001650 -
Lja4g4172 2353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 148 IPR013083 -
Lja4g4172 2353 Gene3D - 1789 1891 - -
Lja4g4172 2353 SMART chromo_7 400 648 IPR000953 -
Lja4g4172 2353 SMART chromo_7 658 715 IPR000953 -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 1964 1986 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 509 529 - -
Lja4g4172 2353 SMART PHD_3 83 126 IPR001965 -
Lja4g4172 2353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 732 976 IPR027417 -
Lja4g4172 2353 Pfam PHD-finger 84 127 IPR019787 -
Lja4g4172 2353 Pfam Chromo (CHRromatin Organisation MOdifier) domain 662 712 IPR023780 -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 1 60 - -
Lja4g4172 2353 Gene3D - 743 985 IPR038718 -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 442 557 - -
Lja4g4172 2353 SUPERFAMILY FYVE/PHD zinc finger 79 129 IPR011011 -
Lja4g4172 2353 PANTHER PROTEIN CHROMATIN REMODELING 4 15 2338 - -
Lja4g4172 2353 ProSitePatterns Zinc finger PHD-type signature. 84 125 IPR019786 -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 305 324 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 472 508 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 305 344 - -
Lja4g4172 2353 SUPERFAMILY Chromo domain-like 578 649 IPR016197 -
Lja4g4172 2353 SMART DUF1087_2 1347 1411 IPR009463 -
Lja4g4172 2353 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 764 941 IPR014001 -
Lja4g4172 2353 Pfam CHD subfamily II, DUF1087 1369 1405 IPR009463 -
Lja4g4172 2353 Pfam SNF2-related domain 770 1045 IPR000330 GO:0005524|GO:0140658
Lja4g4172 2353 CDD SANT_TRF 1817 1861 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 32 60 - -
Lja4g4172 2353 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1071 1230 IPR001650 -
Lja4g4172 2353 CDD PHD2_CHD_II 84 125 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 2333 2353 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 2120 2209 - -
Lja4g4172 2353 Gene3D - 568 665 - -
Lja4g4172 2353 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 15 2338 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 2275 2353 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 1410 1503 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 325 344 - -
Lja4g4172 2353 ProSiteProfiles Chromo and chromo shadow domain profile. 578 646 IPR000953 -
Lja4g4172 2353 ProSiteProfiles Chromo and chromo shadow domain profile. 660 722 IPR000953 -
Lja4g4172 2353 Gene3D - 666 712 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 220 267 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 2306 2331 - -
Lja4g4172 2353 Coils Coil 2349 2353 - -
Lja4g4172 2353 CDD CD1_tandem 577 644 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 1872 1892 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 1971 1986 - -
Lja4g4172 2353 SMART helicmild6 1097 1182 IPR001650 -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 530 557 - -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 1335 1357 - -
Lja4g4172 2353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 978 1233 IPR027417 -
Lja4g4172 2353 SUPERFAMILY Chromo domain-like 652 698 IPR016197 -
Lja4g4172 2353 MobiDBLite consensus disorder prediction 2158 2179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4172 Lja-Chr4 75223052 75240413 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lja4g4172 SNF2_N 1.1e-58 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4172 4 75223052 75240413 Lja4g4172 4 75223052 75240413 ECH