Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3549 ATGGAGAGTAGCGAGGAAGAAGAAGATTTCCCTTCCATTGAGAGCATAATCCCCCAATCCAAGGTTGACTCACTCTACCAGTCTAAAACCGAACAGGGGATTAGAAAGCTTTGCTGTGAGCTCTTAGATTTGAAGGATGCTGTGGAGAACTTAAGTGGCAATATGCACTCAAAATTCTTAGCTTTCTTGAGGATATCTGAAGAGGCTGTGGAAGTAAAACATGAATTGATTGAGCTGCAAAAGCACATCTCAGATCAAGGTATTCTTGTACAGGATTTAATGACTGGTGTCTGCTGTGAATTGGATAAGTGGAAGTCAAGTAATGATGTTACTGACATTCACAATGAACCTGAAGTACCTGAACTCCTTGAGCCCTTACCAAATGAGATGAATAACCAGAAAACAATATTCTTGGAAAATATTGATGTACTTATTGCTGAGCATAAGTTTGAAGAAGCATTAGAGGCATTAGATGCTGAAGAAAGAAACTGTGCTGAGTTGAAAGGCTCAGTGAATAACGCTTCAGATGAAGTTTCCTCATACAAATCTGGTTTCTTGGAAAGAAAGGCAGTGCTTGAAGATCAGCTAATTGCAATTGTTGAGCAACCTTCTGTTAGTTTTCCTGAGCTGAAGAAAGCCTTAAATGGTTTATTAAAGCTTGGAAAAGGTCCTGTAGCACATCAACTAATGCTGAAATTTTATGGGTCTCACCTCCAGAAGAGAGTTGAGGCTTTGCTTCCATCAAGTTCTTTCTGTCCTGCAACATTTCCTTCTACATTATCTAAAATGGTTTTTTCTGTAATTTCACTGACAATAAAGGAATCTGCTTTGATATTTGGAGATAATCCTGTTTATACCAACAGAGTTGTTCAGTGGGCAGAGTGGGAAATTGAATATTTTGTACGATTGGTGAAAGAGAATGCACCCTCATCTGAGACTGTTTCCGCCTTACGTGCTGCTAGCATCTGCATTGAGGCTAGTCTGAACTATTGCTCAATCTTGGAGTCACAAGGATTAAAATTGTCTAAGTTGCTGTTGGTGCTACTGCGTCCTTCTGTTGAAGAAGTTTTAGAATCCAATTTTAGACGTGCTAAAAGAGTAGTTCTTGACATGGCAGAATCTGCTGATTGCTTTACATTGTCACCAGCGTTCGCGTCTTCACTTTCTGCGATTGCATCATCATCCAATAACATGCTTGTTGAAAGTGGAATGCGATTTATGCACATAGTTGAAGAGATACTGGAACAGCTAACACCGTTGGCTAGTCTGCACTTTGGAGGAAATGTACTAAGTAGAATTTTACAACTATTTGATAAATACATAGATGCCCTTATCAAAGCGCTACCAGGTCCTTCTGATGATGAGAATCTTCCAGAACTGAAAGAAGCTGTGCCTTTCAGAGCTGAGACAGACTCAGAACAACTTGCAATATTAGGTATAGCATTTACCATATTGGATGAACTATTACCAAATGCTGTATTATCAACATGGATGCTGCAAAATGAAATCAAGGAACCGAACAGTGGACTCACGGAGAATGTAGTATTAAATACAAATGCTAGTATGGAATTAAAGGAGTGGAGGAAACATCTTCAGCATTCTTTTGACAAACTTCGAGATCACTTCTGTCGGCAGTATGTTCTGACTTTCATCTATTCAAGAGAGGGAAAAACACGATTGAATGCACATATTTACTTGAGTGATAATAGAGAGGATCTTTACTGGGATTCTACCCCATTGCCTTCACTTCCTTTTCAGGCATTATTTGCAAAGCTACAGCAATTAGCAACTGTTGCTGGAGATGTATTACTTGGGAAAGAGAAAATACAGAAAATTTTGCTTGCTAGGTTGACAGAGACTGTTGTCATGTGGTTGTCTGATGAGCAAGAGTTCTGGGGTGTGTTGGAAGATACTTCAGCTCCTCTACAGCCACTTGGTTTGCAGCAGTTAATTCTTGATATGCACTTCACTGTTGAAATAGCACGCTATGCGGGATATCCATCTCGACATGTCCATCAGATTGCATCAGCTATTATTGCTCGTGCCATCCGGACCTTCTCCGCCAGAGGTGTAAACCCACAAAGCGCACTTCCTGAGGATGAATGGTTTGTTGAAATGGCAAAGTCAGCAATAAACAAGCTCTTGCTTGGGGCATCAGGATCAGAGACATCAGACATTGATGAAGATCACATCATTGTTCATGATGACGATGATGTCTCAGACACAGATACTGTTTCATCCCTGTCTACTATGGACTCTACCGAATCTTTCGCTTCGGCTAGCATGGCAGAACTTGACAGCCCCTCTAACCTGTCTGATAATGATAACTGA 2331 0.4045 MESSEEEEDFPSIESIIPQSKVDSLYQSKTEQGIRKLCCELLDLKDAVENLSGNMHSKFLAFLRISEEAVEVKHELIELQKHISDQGILVQDLMTGVCCELDKWKSSNDVTDIHNEPEVPELLEPLPNEMNNQKTIFLENIDVLIAEHKFEEALEALDAEERNCAELKGSVNNASDEVSSYKSGFLERKAVLEDQLIAIVEQPSVSFPELKKALNGLLKLGKGPVAHQLMLKFYGSHLQKRVEALLPSSSFCPATFPSTLSKMVFSVISLTIKESALIFGDNPVYTNRVVQWAEWEIEYFVRLVKENAPSSETVSALRAASICIEASLNYCSILESQGLKLSKLLLVLLRPSVEEVLESNFRRAKRVVLDMAESADCFTLSPAFASSLSAIASSSNNMLVESGMRFMHIVEEILEQLTPLASLHFGGNVLSRILQLFDKYIDALIKALPGPSDDENLPELKEAVPFRAETDSEQLAILGIAFTILDELLPNAVLSTWMLQNEIKEPNSGLTENVVLNTNASMELKEWRKHLQHSFDKLRDHFCRQYVLTFIYSREGKTRLNAHIYLSDNREDLYWDSTPLPSLPFQALFAKLQQLATVAGDVLLGKEKIQKILLARLTETVVMWLSDEQEFWGVLEDTSAPLQPLGLQQLILDMHFTVEIARYAGYPSRHVHQIASAIIARAIRTFSARGVNPQSALPEDEWFVEMAKSAINKLLLGASGSETSDIDEDHIIVHDDDDVSDTDTVSSLSTMDSTESFASASMAELDSPSNLSDNDN* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3549 776 Pfam Exocyst component 84 C-terminal 138 341 IPR032403 -
Lja4g3549 776 Gene3D - 131 245 IPR042561 -
Lja4g3549 776 Gene3D - 254 357 IPR042560 -
Lja4g3549 776 PANTHER EXOCYST COMPLEX COMPONENT EXO84C 1 775 - -
Lja4g3549 776 MobiDBLite consensus disorder prediction 757 776 - -
Lja4g3549 776 PANTHER EXOCYST COMPLEX COMPONENT 8 1 775 IPR033961 GO:0000145|GO:0006887
Lja4g3549 776 Coils Coil 143 177 - -
Lja4g3549 776 SUPERFAMILY Cullin repeat-like 137 357 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3549 Lja-Chr4 66508352 66521551 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3549 4 66508352 66521551 Lja4g3549 4 66508352 66521551 ECH