Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3508 ATGGGAAATCCCTGGGAAATTCTGAGAAATGATGTCTCTTACCCAGTTAGATTCTATGGAGAAGTTATTTCAGGGCCAAATGGAAGCAAACAGTGGATTGGAGGAGAAAATATATTGGCTGTTGCTTATGACGTTCCAATACCTGGATACAAAACTAGAACCACTATCAACCTTCGGTTGTGGACCACTAAGGTTTCACCAGAGGGATTTGATTTACATGCATTCAATACGGGAGATCATGTGAAAGCACACGCTGCTATGAAGAATGCAGAGAAGATATGCTACATTCTGTACCCGGGGGATGAGTCAATAGAAGGAAAGACTCTACGGCTAAAGCAGCAATATACATTATGCTCTGCCTCTCTCCAAGATATTATTGCACGCTTTGAGAAGAGATCAGGAAAGACAGTAAATTGGGACACCCTCCCAGACAAAGTGGTGGTGCAAATGAATGATACTCACCCAACACTCTGCATTCCTGAGCTGATTCGGATATTGATGGATGTAAAGGGTTTAAGCTGGGAGGAAGCTTGGGATATTACTAAAAGAACCGTTGCGTACACAAACCACACAGTTCTACCAGAAGCATTAGAGAAATGGAGTTTGATGCTTCTGCAGGATTTGCTTCCACGACATGTGGAAATAATAAGAATGATAGATGAGGAGTTCATTCATGAAATTATTTCTGAGCATGGGGCACATGATCTTGACTTGCTGCACGAAAAGCTTAGAAATATGAGAATACTTGAAAATATTGAGTTGTCTAATTCAGTGATAGAGCTGCTTAATAATACAAAAGTGGTTCCTGCCATTGATCCTGTTGGTGAAATTGATGTTGATGATGATGATATAATGGCTATAGAAGGGAAAAAAGAAGAAGATGATGGTGGAAATGAAGTAGGGGAAGAGGATGGTGGAGACCCTGTTGGAGAGGATACTGAAAACAAAATACAGAAGACATTCAAAGTTGATCCAAAGCAGCCAATGATGGTTCGCATGGCTAATCTATGTGTTGTTGGTGGATTTTCTGTGAATGGGGTTGCTGAAATTCACAGTGAGATTGTAAAAGAGGAAGTTTTTAATGCATTTTACAAGTTTTGGCCTGAGAAATTCCAGAATAAAACAAATGGGGTTACTCCTAGAAGATGGATCCGTTTCTGTAATCCCAATCTTAGTAAAATCATAACCAAGTGGATTGGAACAGAAGACTGGGTAACAGATCTTGAGAAATTGGCTATACTTCGCCAGTTTGCAGATAATGAGAATCTACTGTTAGAATGGATGGATGCAAAAAGAAGAAACAAGATTAAGGTTGCGTCATTTCTCTTAGAGAAAACCGGTTATGTTGTCAGTCCAGATGCAATGTTCGATGTACAGGTGAAGCGCATTCATGAATACAAACGACAGTTACTGAATATCCTAGGAATTGTTTATCGCTACAAAAAGATGAAAGAACTAAGTGCTGAGGAAAGAAAACAAAGGTTTGTTCCTCGGGTTTGTATTTTTGGTGGGAAAGCATTTTCAACATATGTTCAAGCCAAGAGGATCGTAAAATTCATCACAGACGTAGGAGATACAATCAATCATGATCCTGAGATTGGAGATCTTTTGAAGGTTGTATTTGTTCCTGACTACAATGTCAGTGTTGCTGAAACGCTAATTCCTGGCAGTGAATTATCCCAGCACATCAGCACGGGTGGGATGGAGGCCAGTGGAACAAGTAACATGAAATTTGCAATGAATGGGTGTTTACTTATTGGAACTCTTGATGGGGCTAATGTTGAAATAAGAGAAGAAGTTGGAGAAGAAAACTTCTTTCTTTTTGGTGCACGAGCTCAAGAAATTGCTGGGCTACGGAAAGAAAGAGCAGAAGGAAAATTTGTACCAGACCCACGGTTTGAAGAAGTGAAGGCATATGTTAGAAGTGGCGTTTTTGGTCCTTACAACTATGATGACTTGATGGGTTCCTTAGAAGGGAATGAAGGCTATGGTCGTGCTGATTATTTTCTTGTAGGCAAGGACTTCCCTAGCTACTTGGAGTGCCAAGAGGAGGTTGATAAAGCATATCGTGATCAAAAAAGATGGACAAGAATGTCAATCTTGAACACAGCTGGTTCATACAAATTCAGCAGTGACAGAACTATTAGTGAATATGCTAGAGATATATGGAGAATTGAACCTGTTGCATTGGCTTGA 2196 0.4003 MGNPWEILRNDVSYPVRFYGEVISGPNGSKQWIGGENILAVAYDVPIPGYKTRTTINLRLWTTKVSPEGFDLHAFNTGDHVKAHAAMKNAEKICYILYPGDESIEGKTLRLKQQYTLCSASLQDIIARFEKRSGKTVNWDTLPDKVVVQMNDTHPTLCIPELIRILMDVKGLSWEEAWDITKRTVAYTNHTVLPEALEKWSLMLLQDLLPRHVEIIRMIDEEFIHEIISEHGAHDLDLLHEKLRNMRILENIELSNSVIELLNNTKVVPAIDPVGEIDVDDDDIMAIEGKKEEDDGGNEVGEEDGGDPVGEDTENKIQKTFKVDPKQPMMVRMANLCVVGGFSVNGVAEIHSEIVKEEVFNAFYKFWPEKFQNKTNGVTPRRWIRFCNPNLSKIITKWIGTEDWVTDLEKLAILRQFADNENLLLEWMDAKRRNKIKVASFLLEKTGYVVSPDAMFDVQVKRIHEYKRQLLNILGIVYRYKKMKELSAEERKQRFVPRVCIFGGKAFSTYVQAKRIVKFITDVGDTINHDPEIGDLLKVVFVPDYNVSVAETLIPGSELSQHISTGGMEASGTSNMKFAMNGCLLIGTLDGANVEIREEVGEENFFLFGARAQEIAGLRKERAEGKFVPDPRFEEVKAYVRSGVFGPYNYDDLMGSLEGNEGYGRADYFLVGKDFPSYLECQEEVDKAYRDQKRWTRMSILNTAGSYKFSSDRTISEYARDIWRIEPVALA* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3508 731 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 1 730 - -
Lja4g3508 731 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 234 - -
Lja4g3508 731 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 316 729 - -
Lja4g3508 731 Pfam Carbohydrate phosphorylase 2 251 IPR000811 GO:0005975|GO:0008184
Lja4g3508 731 Pfam Carbohydrate phosphorylase 313 725 IPR000811 GO:0005975|GO:0008184
Lja4g3508 731 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 312 725 IPR011833 GO:0004645|GO:0005975|GO:0030170
Lja4g3508 731 PIRSF Glucan_phosphorylase_GlgP 2 260 IPR000811 GO:0005975|GO:0008184
Lja4g3508 731 PIRSF Glucan_phosphorylase_GlgP 276 731 IPR000811 GO:0005975|GO:0008184
Lja4g3508 731 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 569 581 IPR035090 -
Lja4g3508 731 Gene3D Glycogen Phosphorylase B; 1 380 - -
Lja4g3508 731 Gene3D Glycogen Phosphorylase B; 381 710 - -
Lja4g3508 731 PANTHER GLYCOGEN PHOSPHORYLASE 1 730 IPR000811 GO:0005975|GO:0008184
Lja4g3508 731 MobiDBLite consensus disorder prediction 289 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3508 Lja-Chr4 65971871 65978146 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3508 4 65971871 65978146 Lja4g3508 4 65971871 65978146 ECH