Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g2136 ATGCTCGAATCCCCCAAACTCTCTACTCTGCTCTCATTCCATTCCAACACTCTGATCAACCACTCACGTGCATTGTTCTGCTGGTGCCGGATGATGATGCAGAGGGTCACCGCAATCAGGAACCCTGAAGAAGGTGGCGGCGGCGGCGGTGATGCCGACAAAAATCACCACCACAACCTCTCACTCTGGGAAACCTTTAACAGCAAATGCAATGTCTTCCCTCTCAATCTGATGCGTTTGATGGGCTTCTTCGTCCTCTCTTTCATCCTCTTCTCCGTTCTCTTCTCTCTCTCCGTCGTTCTCCGTGACCCTCCCTCCGATGCCGCCCTTCACCAACCACCACCGACAACAACAACCACCACTGTTTTCCATCTCAACCAACCACAACAAGGTTTGGACAATGATGCCTTTGATTCTGCTGAGTTGCTAAAGGATAAACTGCTCGGTGGCCTTCTAGCTGATGGGTTTGATGAAAAATCTTGTCTCAGCAGGTATCAGTCAGTTATGTATCACAAGGGACTATCAGGAAAGCCTTCTTCTTACCTTATTTCTAGATTAAGAAAATATGAAGCTCTACACAAAGAATGCGGACCTTATACCGAATCCTATAATAAAACTGTGAAACAACTCAGGTCTGGTCAATTTACTGAATCCCCAGCTTGTAAATATGTAGTGTGGGTTTCATTTAGTGGGTTAGGGAATAGGATATTGACCCTAGCTTCTGCATTTCTCTATGCTCTCCTCACAAACCGAGTTTTACTGGTTGACCCTGGAGTGGATATGATTGATCTCTTTTGTGAACCGTTTCCAGATACATCCTGGTTTCTCCCTCCCGATTTTCCTCTCAACAGTCAACTAAATAATTTCAGTAAGGAATCTCGTCAATGCTATGGGAAAATGCTGAAAGAAAAATCAATTACAAACTCCACCGTGCCATCTTCTGTCTACCTTCATTTAGTCCATGATTATGATGATCATGATAAGCTTTTCTTCTGTGATGAAGAGCAAGTGTTTCTAAATAAAGTACCTTGGTTAGTGATGAAAACAGATAATTATTTCGTTCCATCTCTATTCTTGATGCCATCTTATGAGCAGGAACTGAATGATCTCTTCCCAAAGAAAGCAACAGTGTTCCATTTCTTGGGTAGATATATGCTCCACCCCACAAACAATGTGTGGGGACTTGTTGTCAGATACTATCAAGCTTATTTAGCTAAAGTTGATGAAAGAGTAGGCATACAAATTAGAGTGTTTGTTCCAGAACCTGGTCCATTTCAACATGTTCTGGATCAGATCTTAGCTTGTACTTTGAAGGAGAATCTTTTACCCGATGTTGACCGTGAGCAGAATAATATTAGTTCATCTGGACTACCAAAGTCAAAAGCTGTGCTCATGACATCCTTAAGCTCTGGTTATTTTGAAAAGGTAAGAGACATGTATTGGGAGTATCCTACCGTGACAGGAGAAGTGGTCGGCGTTTTCCAGCCAAGCCATGAAGAGTATCAGCAAACGCAGAAGCAGATGCACAACCTAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACAGACGTGTTGGTTACTAGCTCGTGGTCTACTTTTGGCTATGTGGCTCAGGGGCTTGGAGGTTTGAAACCATGGATACTCTACAAACCTGAGAATCAAACCGCTCCGGATCCTCCTTGTCAACGTGCCATGTCAATAGAGCCATGTTTCCATGCTCCTCCCTTCTATGATTGCAAGGCTAAGAGAGGAATTGACACAGGTGCACTTGTTCCTCATGTAAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAA 1833 0.4354 MLESPKLSTLLSFHSNTLINHSRALFCWCRMMMQRVTAIRNPEEGGGGGGDADKNHHHNLSLWETFNSKCNVFPLNLMRLMGFFVLSFILFSVLFSLSVVLRDPPSDAALHQPPPTTTTTTVFHLNQPQQGLDNDAFDSAELLKDKLLGGLLADGFDEKSCLSRYQSVMYHKGLSGKPSSYLISRLRKYEALHKECGPYTESYNKTVKQLRSGQFTESPACKYVVWVSFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMIDLFCEPFPDTSWFLPPDFPLNSQLNNFSKESRQCYGKMLKEKSITNSTVPSSVYLHLVHDYDDHDKLFFCDEEQVFLNKVPWLVMKTDNYFVPSLFLMPSYEQELNDLFPKKATVFHFLGRYMLHPTNNVWGLVVRYYQAYLAKVDERVGIQIRVFVPEPGPFQHVLDQILACTLKENLLPDVDREQNNISSSGLPKSKAVLMTSLSSGYFEKVRDMYWEYPTVTGEVVGVFQPSHEEYQQTQKQMHNLKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENQTAPDPPCQRAMSIEPCFHAPPFYDCKAKRGIDTGALVPHVRHCEDMSWGLKLVDN* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g2136 610 Pfam Xyloglucan fucosyltransferase 138 581 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja4g2136 610 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 73 610 - -
Lja4g2136 610 PANTHER FUCOSYLTRANSFERASE 2-RELATED 73 610 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja4g2136 610 Gene3D - 219 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g2136 Lja-Chr4 22890802 22893496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g2136 78 608 Xyloglucan Fucosyltransferase1 AT2G03220 63.158 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g2136 K13681 - gmx:100803305 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g2136 4 22890802 22893496 Lja4g2136 4 22890802 22893496 ECH