Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1163 ATGAAAAAGGACAAACTTTCCTTTTTCTTTTGTTTTTGTTATTGTTTTTGTTTGCTTTGCTTGTTTACCTCAAACTCATCTTTCTTCTTCTTCTTCTATTCATTCTTCCTTTCATTGGTCGTTTATCATCTGATTCAGAGAGCAGAAGCAGTGGAAGCTAGCATGGGAAGAAGCAAGTGGTCAACGTTGCTCTTCTTCGTTCTCGCAATCCTGCACGGAACTCACGTGAGATCCGATGCCTCCGATCACCGTTACAAGGACGGTGACCTCGTTCCTCTCTACGCCAACAAAGTCGGTCCATTCCACAACCCCAGTGAAACGTATCGATACCTAGACCTGCCATTCTGTGTAACAGGTAAAGAGAGAGAGAAAACGGAAGCACTTGGCGAGGTGTTGAATGGAGATCGCCTTGTTAGTGCTCCGTATGAGCTTGATTTTAGAAAGGAGAAAGACTCTAATGTTGTGTGCAAGAAGAAGCTCACAAAGGCGCAAGTTGCTCAGTTCCGAGAAGCAGTTAAGAAGGACTATTATTTCCAAATGTATTATGATGACTTGCCAATCTGGGGATTTATTGGAACAGTTGACAAAGAAGGAAAGACCGACCCTAGCGAGTACAAGTATTTTCTTTACAAGCACATTCAGTTTGATGTTCTGTACAACAAAGATCGTGTGATTGAGATCAGTGCCCGGATGGATCCTCATTCCGTTGTGGACCTGACTGAGGACAAGGAAGTTGATGTTGAGTTTATGTATACTGTAAAGTGGAAGGAGACAGATACTTCTTTTGAGAAGAGAATGGATAAATACTCGCAGTCTTCTTCTCTGCCACATCACTTGGAGATTCATTGGTTCTCAATCATAAACTCATGTGTAACAGTTCTTCTTTTGACTGGTTTTCTGGCAACCATTCTCATGCGTGTCTTGAAGAATGACTTTATGAAATATGCTCAAGATGAGGAAGCTGCTGATGATCAGGAGGAGACGGGATGGAAGTACATTCATGGTGATGTTTTCCGGTTTCCTAAGTACAAGTCCTTGTTTGCAGCAGCCCTTGGTTCTGGCTCTCAGTTATTCACTCTTACAATCTTCATTTTTATGCTTGCACTGGTTGGTGTATTTTATCCCTATAACCGAGGAGCTTTGTTTACTGCACTGGTGGTCATTTATGCTCTTACATCTGGCATTGCTGGCTACACTGCTACTTCCTTCTATATTCAACTTGAAGGATCTAACTGGGTTAGAAACTTATTGCTGACAGGGTGCCTCTTTTGTGGCCCTCTTTTCCTCATGTTCTGCTTCCTTAACACAGTTGCAATTGCTTATAGTGCAACCGCTGCTCTTCCATTTGGCACAATTTTGGTGATAGTCCTAATATGGACATTGGTTACGTCGCCATTACTTGTGTTGGGTGGTATTGCAGGTAAAAATAGCAAAACTGAGTTCCAAGCTCCTGTCCGCACTACAAAGTATCCCCGAGAGATTCCACCTCTGCCTTGGTACAGAAGTACCATTCCACAGATGGCAATGGCAGGGTTTCTCCCTTTCAGTGCCATATACATAGAGCTGTACTACATTTTTGCTAGTGTATGGGGCCACAGAATTTATACTATCTACAGCATACTCTTCATCGTCTTTATTATTCTGTTGATTGTCACCGCGTTCATCACTGTGGCTCTGACATATTTCCAACTTGCTGCTGAAGATCATGAATGGTGGTGGAGGTCTTTCCTTTGTGGTGGATCAACTGGCTTGTTCATCTATGGTTACTGCCTGTATTATTACTATGCACGATCAGACATGTCTGGTTTCATGCAAACCTCGTTCTTCTTCGGTTACATGGCCTGCATCTGCTATGGCTTCTTTCTCATGCTCGGTGCTGTAGGTTTCCGTGCCTCGCTGCTCTTTGTCCGCCACATATACAGGTCCATCAAGTGTGAGTAG 1941 0.4323 MKKDKLSFFFCFCYCFCLLCLFTSNSSFFFFFYSFFLSLVVYHLIQRAEAVEASMGRSKWSTLLFFVLAILHGTHVRSDASDHRYKDGDLVPLYANKVGPFHNPSETYRYLDLPFCVTGKEREKTEALGEVLNGDRLVSAPYELDFRKEKDSNVVCKKKLTKAQVAQFREAVKKDYYFQMYYDDLPIWGFIGTVDKEGKTDPSEYKYFLYKHIQFDVLYNKDRVIEISARMDPHSVVDLTEDKEVDVEFMYTVKWKETDTSFEKRMDKYSQSSSLPHHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFMKYAQDEEAADDQEETGWKYIHGDVFRFPKYKSLFAAALGSGSQLFTLTIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIAGYTATSFYIQLEGSNWVRNLLLTGCLFCGPLFLMFCFLNTVAIAYSATAALPFGTILVIVLIWTLVTSPLLVLGGIAGKNSKTEFQAPVRTTKYPREIPPLPWYRSTIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGAVGFRASLLFVRHIYRSIKCE* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1163 646 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 63 646 - -
Lja4g1163 646 Pfam Endomembrane protein 70 107 603 IPR004240 GO:0016021
Lja4g1163 646 SUPERFAMILY MFS general substrate transporter 279 463 IPR036259 -
Lja4g1163 646 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 63 646 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1163 Lja-Chr4 10333151 10339275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g1163 61 646 Miscellaneous Gene Families AT2G01970 89.474 0.0 1073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1163 4 10333151 10339275 Lja4g1163 4 10333151 10339275 ECH