Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g1123 ATGGCTGCCAACAAGTTTGCAACCATGTTGCACAGAAACACCAACAAAATCACCCTTGTTCTAGTCTATGCCATCCTTGAATGGATTCTGATCATCCTTCTCCTTATAAATTCTCTGTTTTCTTATCTGATCATAAAGTTTGCTGATTACTTTGGCCTCAAGAGACCCTGCATATGGTGCACCAGAATTGATCACATCATAGAGCCTGGAAAAATCGAAAACTCTTGCAAAGATCTTGTGTGTGAAGCTCATGCTTTTGAGATTTCCAAGCTTGGTTTCTGCTCTGATCATCACAAACTTGCTGAATCAAAGGACATGTGTGAGGATTGCTCATCCTCATCACAGCCAAATTATGTTAAATTGCCTCGGAGTTTTGGTTTCTTTCCATGGATGAAGCAAATTGGGATGATTCATGATGCTGATGATAAGAAAATTGAGAAAGTGGAAGTGGATTTGAAGTGTTCTTGCTGTGGTGTGAACATAGAAAGGAGATTTTGCTCTCCTTGCATTCTTCTCAAGCCTTCTCTGGAGGATTTGGATGATGAAAAAAAGCAGAATTTGATCACAGAAGGTGGGGTTGATGCAGAGATTGAAGATTGTGATCACTTAGATCAGAGAGGATCAGATTTTGTGCTTGATCATCATGAAGAAGAACAGAACACTGAAGAAAACAGGGGAAAAAACAGGGGAAGTCACATGTTGTTTGAGGTTCAACAAGGTTCAGGTAGAAGAGAAGAAGAAGAGGCAGATGAGAGTTGTGCTTGTTCTGTATGTGATGGTGGCATGGAGCTTGTTACTGATGAAATTTACAAGTTTGATTTGGCTGCTGAGAAAGGGAAAGAAACTTTGAAAGATGAAACTTTGAATGTCCTAAAGCTTGAGAATGATGATCATGATGACCAACCTTGTGGGCAGAACCCTTCTCCAGTTGAAAGCACTAATGGGATAAATGTGGAAATTCCACCCAAGCATCTGGATTTTTTCATTCATGGTGATGATTGCCAACTGATTCCTGTTGAATTGGTTGATTCCCCAATCACAGAAAATGGAAATCAAAGTAGATATAATATGGGGGGTGAAGAAGATTTTATTCTGGATTTTGATAAGAGTGCTGAGGCAGAAGCTGAACCAGTTATTGAGAATTGGCATGTTTCTGGGGATACTTTGATAGACTTCTCATCTCATGAGAATAAAGATGTCTTCAAGGCCAATACTGTTGAATCAACTCAATTATGGACAAGAGGGTTACAAGAAGAAGAAAATTTAATGCAGAATTATCAAAATGTGCGATTTTCTCAAACAGCTGAAGACCTGTCTAAGGATGATGATTTTGAAGTAAATGTGGAAAGAAGAGATGCAGAACTGTGTTCCAATGTTTCTCAAGCCTCTGAAGATACATCACAAATGCTGGGTGAGGAATTGGAGGCAGAAGTCTCAATAGGGACTGAAATTCCTGATCAAGTGGATGATGACTACCAAAGCTACGATTTCCTTTCAGATGCGAATCAACGAACTCAAGAAGATTCATCTAGTACAGACAGATTTCATGTCCAAGATGATAGTGGTCATGACAAAGGACAAGAATTTTTAGAGTTCAATACCATGTCATTTGAATTGAGAATGCCAACAGTAAACAACCACTTGTCATCATCATCTTTGGATGTTAATGAGAATGAGGAGGAAAAAGTTCCTGACACACCCACTTCTTTGGAGAGTCTTCACAGTCTACACAAGAAACTGCTTTTTCTGGATAGAAAAGAATCAGGAACAGAAGATTCATTGGATGGAAGTGTCTTGAGTGATATAGAATGCGGTGAGCTTACAGTTGAGAATTTAAAGTCAGCATTGAAATCTGAAAGGAAGGCTTTAAAGACTCTATATGCAGAACTAGAAGAAGAGAGAAATGCATCTGCTGTAGCAGCAAATCAAACAATGGCAATGATTAACAGGCTTCAGGAAGAGAAAGCAGCAATGCAGATGGAGGCATTGCAGTACCAGAGAATGATGGATGAACAATCTGAGTATGATCAAGAGGCTGTGCAGCTTCTGAATGAGCTTATGATGAAGAGGGAGAAAGAGAAGCAAGAGGTGGAAAAGGAGCTTGAAGTGTATAGAAAAAGGGTTCATGAGTATGAGGTAAGAGAAAAGATGATGATGTCAAGAAGAGATGGTAGCAACAATAGCATGAGAAGCAGAACTTCATCTCCTTCTTGTAGCAATGCTGAAGATAGTGACGAGTTGTCGCTTGATTTGAATCACGAATCGAAGGAAGAAAATGGATCTTATAGCCATCAAGAAAGTAGCAACCAGAACACACCGGTGGATGCGGCCTTATATTTGGAGGAATCATTGGCAAACTTTGAGGAAGAGAGGCTATCAATTCTAGAACAGCTCAAATTACTTGAAGAAAAGCTAGTTATATTGAGTTATGAAGAAGAACATAGCTTTGAATTTGATGATACTAATTCAAATGAACATCTTTGTGAAGAGAATGGGAATGGATATCATCATGACCATGATGATGATCACAAAGGTCATGTAAATGGGTTTGCAAATGGTAATGGAAAGCATCATCAAGGGAGGAAAATCATGGCTGCAAAAGCCAAGAGGCTTCTCCCACTTTTTGATGCAATCAGCACAGAAGAAGAATCAGAAGATGTAGAGTTGAGTGGAGATGAAAAGGAGTTAGATTTTCCCCATTTGCAAAATGGTTCAGCAGAAAAGGTTCATTTGGATAAGGAAAGGCTTGGTTTAGAAGAGGAGGTGAATCATGTTTATGAGAGACTACAGCTTCTGGAGGCAGATAGAGAGTTTCTAAAGCACTGTGTCAGCTCCTTGAGAAAAGGGGACAAAGGGTTGGATCTTCTCCAAGAAATTTTGCAACATCTTCGTGATCTGAGGAATGTGGAACTCAGAGTTAAGAACATGGAAGATCTTGCAGTATAA 2946 0.3941 MAANKFATMLHRNTNKITLVLVYAILEWILIILLLINSLFSYLIIKFADYFGLKRPCIWCTRIDHIIEPGKIENSCKDLVCEAHAFEISKLGFCSDHHKLAESKDMCEDCSSSSQPNYVKLPRSFGFFPWMKQIGMIHDADDKKIEKVEVDLKCSCCGVNIERRFCSPCILLKPSLEDLDDEKKQNLITEGGVDAEIEDCDHLDQRGSDFVLDHHEEEQNTEENRGKNRGSHMLFEVQQGSGRREEEEADESCACSVCDGGMELVTDEIYKFDLAAEKGKETLKDETLNVLKLENDDHDDQPCGQNPSPVESTNGINVEIPPKHLDFFIHGDDCQLIPVELVDSPITENGNQSRYNMGGEEDFILDFDKSAEAEAEPVIENWHVSGDTLIDFSSHENKDVFKANTVESTQLWTRGLQEEENLMQNYQNVRFSQTAEDLSKDDDFEVNVERRDAELCSNVSQASEDTSQMLGEELEAEVSIGTEIPDQVDDDYQSYDFLSDANQRTQEDSSSTDRFHVQDDSGHDKGQEFLEFNTMSFELRMPTVNNHLSSSSLDVNENEEEKVPDTPTSLESLHSLHKKLLFLDRKESGTEDSLDGSVLSDIECGELTVENLKSALKSERKALKTLYAELEEERNASAVAANQTMAMINRLQEEKAAMQMEALQYQRMMDEQSEYDQEAVQLLNELMMKREKEKQEVEKELEVYRKRVHEYEVREKMMMSRRDGSNNSMRSRTSSPSCSNAEDSDELSLDLNHESKEENGSYSHQESSNQNTPVDAALYLEESLANFEEERLSILEQLKLLEEKLVILSYEEEHSFEFDDTNSNEHLCEENGNGYHHDHDDDHKGHVNGFANGNGKHHQGRKIMAAKAKRLLPLFDAISTEEESEDVELSGDEKELDFPHLQNGSAEKVHLDKERLGLEEEVNHVYERLQLLEADREFLKHCVSSLRKGDKGLDLLQEILQHLRDLRNVELRVKNMEDLAV* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g1123 981 MobiDBLite consensus disorder prediction 833 847 - -
Lja4g1123 981 PANTHER MYOSIN-BINDING PROTEIN 2 1 978 IPR039306 GO:0017022
Lja4g1123 981 MobiDBLite consensus disorder prediction 722 745 - -
Lja4g1123 981 PANTHER MYOSIN-BINDING PROTEIN 3 1 978 - -
Lja4g1123 981 MobiDBLite consensus disorder prediction 548 569 - -
Lja4g1123 981 Coils Coil 959 979 - -
Lja4g1123 981 Coils Coil 784 804 - -
Lja4g1123 981 Pfam Zein-binding 611 701 IPR007656 -
Lja4g1123 981 MobiDBLite consensus disorder prediction 715 747 - -
Lja4g1123 981 Coils Coil 609 636 - -
Lja4g1123 981 MobiDBLite consensus disorder prediction 507 525 - -
Lja4g1123 981 Coils Coil 641 714 - -
Lja4g1123 981 MobiDBLite consensus disorder prediction 833 859 - -
Lja4g1123 981 MobiDBLite consensus disorder prediction 502 525 - -
Lja4g1123 981 ProSiteProfiles GTD-binding domain profile. 607 705 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g1123 Lja-Chr4 9900669 9905264 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g1123 4 9900669 9905264 Lja4g1123 4 9900669 9905264 ECH