Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0705 ATGGTGAAGATCATTGAAGAAATGGACCTCTTTGATGAACAAGTAACTGGGTTCACTGAAGATGATGAGCAAATCGACTATGATAAGCTGAAGGAACGCATGTGGAGGGATAGGATTCTTCTGCAGAAGCTGAAGGAGAAAGGAGAAGAACCAGAGCTTGAAGCAAAACAAGAGGCATCAAGGAGGAAGAAGATGTCAAGAGCACAAGACTCAATCCTCAAGCACATGATGAAGATCATGGAAGTTTGCAACGCTCAAGGCTTTGTCTATGGAATCATCCCAGAAAAGGGAAAACCAGTCACTGGTTCCTCAGAAAGCTTGAGACAATGGTGGAAAGAAGATGTCAAATTCACAAAAAATGCTCCCTCTGCATTAACCAAGTTCTTTCCCCTCCTTGAAAACCAAGAGTTTGATCCAAATTCATATATTCATCTATTGAATGACTTGCAAGATACAACATTGGGTTCTCTGCTTTCTGCTCTGATGCAACACTGTGTTCCTCCACAGAGAAGATTCCCACTTGAGAGAGGCCTGGCACCACCATGGTGGCCCAAGGGGACAGAGCAATGGTGGGGTGAACAGGGCTTTCTGGCTCAAGAACAAGGGCCACCTCCTTATAGAAAGCCTCATGACTTGAAAAAGGCTTGGAAAGTTTCTGTGTTGGCTGCTGTTATCAAGAACATGTCTCCTAATTTGGATAGAGTGAGAAGGTTTGTGACTCAGTCCAAGACTTTGCAAGGTAAGATGACAGCCAAAGATATTTCAACTTGGTCCAAAGTTATGAACCAAGAGGAAGCCTTGCTGAAAATACCTCCATCAGATCACAAAGATGGAAATTGCCAACAAGGTACTAAAAAGAGGAAGAACATGTTTGATTTATATGATGCTGCTGCTGTTGTTGCTGATGATAAGGTGTATTCTTGTCAATATGCTGAGTGTCCTCAGAGTGATTTGTGTGTGGGATTTCCTGATAAAAGTTCAAGGATGAATCATGAATCTCTCTGTGCTTACCGCAATGACCAAAGCCATGATTCTTTACATGATTACCTGTCAAATGACACTAGAAAGGTAAGTGTTGATGATTGGATTAGTATGGAGCTAGAAAGGGCTCATCAGAATCAGAATGATCTTGTTGGGAATGTGAATGAGACAGAAGATTTTAGTGGCTGTTGGCTAAATGGCATTCAAGATCTTGGCTTGCAATTGGAACAAGTGATGCCACAAGGTCAAGAAGATACCCCAATTTGGGACTTTGGATACAATTAA 1266 0.4202 MVKIIEEMDLFDEQVTGFTEDDEQIDYDKLKERMWRDRILLQKLKEKGEEPELEAKQEASRRKKMSRAQDSILKHMMKIMEVCNAQGFVYGIIPEKGKPVTGSSESLRQWWKEDVKFTKNAPSALTKFFPLLENQEFDPNSYIHLLNDLQDTTLGSLLSALMQHCVPPQRRFPLERGLAPPWWPKGTEQWWGEQGFLAQEQGPPPYRKPHDLKKAWKVSVLAAVIKNMSPNLDRVRRFVTQSKTLQGKMTAKDISTWSKVMNQEEALLKIPPSDHKDGNCQQGTKKRKNMFDLYDAAAVVADDKVYSCQYAECPQSDLCVGFPDKSSRMNHESLCAYRNDQSHDSLHDYLSNDTRKVSVDDWISMELERAHQNQNDLVGNVNETEDFSGCWLNGIQDLGLQLEQVMPQGQEDTPIWDFGYN* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0705 421 Pfam Ethylene insensitive 3 29 265 IPR006957 GO:0005634
Lja4g0705 421 SUPERFAMILY DNA-binding domain of EIN3-like 143 268 IPR023278 GO:0003700|GO:0005634
Lja4g0705 421 PANTHER ETHYLENE INSENSITIVE PROTEIN 17 406 - -
Lja4g0705 421 Gene3D - 54 129 IPR023278 GO:0003700|GO:0005634
Lja4g0705 421 Gene3D - 136 274 IPR023278 GO:0003700|GO:0005634
Lja4g0705 421 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 17 406 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0705 Lja-Chr4 5826698 5828010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0705 13 352 EIL Transcription Factor Family AT5G10120 54.622 1.71e-130 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lja4g0705 EIN3 2.1e-110 No_clan