Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5263 ATGGATAAAATGGGATTAAGTTTCAAGAGATTCAGAACATTAGTGGTTCTGGGTTCCATAACCTTCTCTATTTTAATCACATTTTCTCTTATGCACCAAAACTCAATCTTCCAACTTGTTGACGGGTTTTCGAAGATTGACGTTTTGGCTGCAAGGCCCCAGAATGCTACTACCAATGTCTTGGAACAAGGGGATACAACTGTCACAGTTAAAGCTGGGGGTGGAAAAGATCAGAATATCACAGAGGTAGATAAGGCGTTGAGAGACAAAGATCAAAATGATATGCCTGGGATCTTCCCTGAACAAGCTCATACACAAACAATCTCAGATATTGGTCCGAAGAATCTTTCATTTGAAGACAAGAAGAATGACCCATCCCTATCTACTACGAGCATTACTAATGACCAACTCCTTGATGGACTTCTTGTTTCCACATTTGATAAAGCAATGTGCTTAAGTAGGTTTCAGTCTCACTTATACCGCAAAGCTTCCCCTCATAAGCCTTCTGCATATTTGATATCCAAGCTACGAAATTATGAAAGTCTTCATAGAAGTTGTGGACCTCATACCAAATCCTACAACAAAATAATGAGTAACGGCGCAAAATTTAGCAAAAACAGTGCAGGCATAAAGTGCAAATACCTTGTGTGGACAGCTTCCAATGGCTTAGGGAACAGGATGTTAACCTTGGCTGCAGCATTCCTTTATGCTATCCTCACAGACCGTGTGCTACTTGTCCAATTTAGGGCTGATATGTTTGATCTCTTTTGCGAGCCATTTCCTGATTCCTCATGGTTATTGCCCAGGAATTTTCCTTATTGGAAAGATCAGAGACATATTGAAACTTATGAAAATGTGCTGATGAAGAGCAAGAAAAACATTTCACCAGAGGTTTTGCCACAATTTCTTATTCTTAATCTACAACACACCCATGATGGTCATAATAACTTCTTTCATTGTGATCGAAGTCAAGGACTTCTCCAGAAAGTTCCTGTGCTGATATTGTGGTCCGATCAATATTTCGTCCCTTCTCTGTTTATGATTCCATCATATAGACAAGACTTGATCAAAATGTTCCCTCAGAAAGACACTGTTTTTCACCATCTGGGACGTTACCTTTTTCATCCATCAAATGAGGCATGGGAACTAATAAGCAGGTCGTACAAGGCGCACTTAGCCAAGGCGGATGAGAAGATTGGCCTGCAGATTAGAGTATTTAACTCTCGCAATCACAAGACACCACATCAAACCATTGTCAATGAAATTATAGCCTGCACCAGCAAGCATAAGCTACTGCCTGAGTTAGACATGCAAAAATCAGCAACTTATTTGAAGAAACAGACATCAAAAGCTGTTCTAGTGGCATCTTTATATTCAGTATATGGTGAGAAACTGCGGACTATGTACCTGACAAACACAACTGTGACCAGGGATAAAGTGATAGAAGTTTTTCAGCCAAGTCATGAAGAGCGTCAAAATTCAAATAATGACACGCACAATATCAAGGCATGGACTGAAATATATTTGTTGAGTTTGTGTGATGCATTGATTACAAGCTCCAAGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTATGAAGCCATGGCTTCTGCGCAGGGCTTATGGGGAAACCATCCCAGATCCACCTTGTAAACGAGTCAAGTCCATGGAGCCTTGTTTCCACTATCCTCCCAAATATGACTGTAGGGACAATAGAACGCTTCCATAA 1734 0.4043 MDKMGLSFKRFRTLVVLGSITFSILITFSLMHQNSIFQLVDGFSKIDVLAARPQNATTNVLEQGDTTVTVKAGGGKDQNITEVDKALRDKDQNDMPGIFPEQAHTQTISDIGPKNLSFEDKKNDPSLSTTSITNDQLLDGLLVSTFDKAMCLSRFQSHLYRKASPHKPSAYLISKLRNYESLHRSCGPHTKSYNKIMSNGAKFSKNSAGIKCKYLVWTASNGLGNRMLTLAAAFLYAILTDRVLLVQFRADMFDLFCEPFPDSSWLLPRNFPYWKDQRHIETYENVLMKSKKNISPEVLPQFLILNLQHTHDGHNNFFHCDRSQGLLQKVPVLILWSDQYFVPSLFMIPSYRQDLIKMFPQKDTVFHHLGRYLFHPSNEAWELISRSYKAHLAKADEKIGLQIRVFNSRNHKTPHQTIVNEIIACTSKHKLLPELDMQKSATYLKKQTSKAVLVASLYSVYGEKLRTMYLTNTTVTRDKVIEVFQPSHEERQNSNNDTHNIKAWTEIYLLSLCDALITSSKSTFGYVAHSLGGMKPWLLRRAYGETIPDPPCKRVKSMEPCFHYPPKYDCRDNRTLP* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5263 577 Gene3D - 382 537 - -
Lja3g5263 577 Pfam Xyloglucan fucosyltransferase 124 571 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lja3g5263 577 Gene3D - 210 266 - -
Lja3g5263 577 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 8 574 - -
Lja3g5263 577 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 574 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5263 Lja-Chr3 94852331 94856720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5263 128 571 Xyloglucan Fucosyltransferase1 AT2G03220 51.225 2.45e-150 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5263 K13681 - gmx:100799776 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5263 3 94852331 94856720 Lja3g2218 3 26396185 26398631 PCT