Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5124 ATGAGAGAAAAAGAGAGAGAAAATAAGATCAGCAGAATTCTCCTTCTCCCTCTATTGCTATACCTCATCATCATCTTGCTTCACCACTCTGAAGCTGATGATGACATTGCCATTTACGGGGGTCAACACGCCAAAGATGGGAACCTTACAGAAACATGTGCAACAAGGAAATACTCCTATGTCATGATAGCTTTTCTTTCCACCTTTGGGAAAGGCCAGACCCCTCAAATCAACCTGAATGGTCATGGTCAGTGTGAGAATGGCTGCACTGAGATGGAGACAGACATTAGGAACTGTCAAAAGCAAGGGATCAAGGTGATGCTCTCCATAGGAGGAGGATCTATGAACTATTCTCTAGGTTCCAATGATGAAGCTAAAATTCTCTCAGACTACTTGTGGAACAATTTCCTTGGTGGCTCGTCCTTGTCACGCCCATTTGGGAGTGCGGTATTAGATGGCATAGATTTTTTCGTAGTGCGACAAACACCATACATGGAGAGCCTTGCATGGCACCTCAAGTTACACACATCAACACAACAAGCTGTGTACTTATCTGCAGCACCTTATTGCCCATTTCCTGATCTTGCACTGGGTTCAGCTCTTAATGACGGTCTTTTTGACTATGTCTGGGTAAAATTTTACGATAATCCTGCATGCAGTTTTAGCCATGGAAATTATGATAATGCTATGAATATATGGAACCAATGGACCAAGTTACCAAAAGGAGGGAAAATATATCTGGGTTTGCAAATATATCAAAAATATACTGATTATATTCCACCTGATGTATTGGTATCTAAGATCTTACCTATGATAAAGAAGTCATCAAATTATGGAGGGGTAATGTTGTGGTCAAGGTACTTTGATAAAAAGAATGGATACAGTGCCTACATTCAAAATTATACTGTGTGTACACAGCAAAGCCTTCCCAGATGCAACAGCCATGACAGTGGCTTTGTGAAACGTTTTGGTTCCATGTCCACACCTGGAATCAAAGTTTATGATGGTGAGAACCTTGGTGCACACTGCTGTGAGATCATTTGTAGGAACAACTGTTCCTGTGAAGCGTATGCACTCTCAAATAATGTTAACAATACTGGATGCATAATATGGGGGACAGGAACAAGCTTCATTACAGATTCTGGGGAAACATCACAGCTCATCTATGTTGTTAAACATGAAGTTGTATCTGGATTCCTAACCTCAACCTTTTCAAACCGGCGGTTGAGATGGCTCATCATTGGGGTCGGAGCAGCAACCATTGCAATACCTGTGATCTTCTTCTATTTATGTAGAGCTCTGTGGAGAAGATACAAAGCAGAAGTGGCTAGAAAAACGATGCAGAAAGAGCTAATACATGAGATTGGAGGTAATGCCATGCTTTCTATGGTGTACGGAAAAATCACAAAAAGTAAGAACAGGGAAAAGATAAGCAATGAGGTTCAAATGTTCAATTTGGAAAGCATAGCTGCTGCCACAAACAGTTTTTCAGTAGCTAATAAGCTAGGAGAGGGTGGTTATGGCCCTGTTTATAAGGGAACATTAAGAGATGGGCAAGAGGTAGCAATTAAGAGACTTTCTAAGAGTTCAGGACAAGGGCTGATAGAATTTAAGAACGAAGCTAAACTCATGGCCAAACTCCAGCACACTAATCTTGTAAAGCTTTTGGGATTTTGCATTCAGAGAGATGAAAGAATAATAGTCTATGAGTACATGTCTAACAAGAGCTTAGACTTGTACTTATTTGATTCAACTAGAAAGAATTTGCTAGACTGGGAAAAGCGCTTGAACATCATTGAAGGCATTGCACAGGGACTTCTTTACCTTCACAAGTATTCAAGACTAAAGGTGATACATCGTGACCTGAAAGCAGGCAATATACTACTCGATGAAGAGATGAATCCTAAAATATCTGACTTTGGCATGGCTCGAATATTTGGTTTAAGAGTGTCACAAGAAAAGACAAACAGAGTAGTTGTTCATGCTGCTGAGTATGCAATAAATGGTATTGTGTCTATCAAAACAGATGTATTTAGCTTTGGTGTATTGCTGTTAGAGATTCTTGGTGGCAAGAAAAATAACAGTTGCTATGATTCTAATCGTCCTCTCAGCCTCATAGGATATGCATGGAAGCTCTGGATTGAAGGTAGAGCCCTTGAGCTAGTAGAGCAAGCACTAAATGAATTGAGTTCTCAAAATGAAATTTTGAAATGTATTCACATTGGCCTCTTGTGTGTACAAGAACAAGCAAAAGATAGACCTACCATGTTAGATATTGTTTCATTTCTAACAAATGATACAATCCAACTTCCCCAGCCAAAGCAACCTGCATTCTTCATCAATGTAATTGCAGAAGAGTCAGAGGTTCCTTACAGCAGGCAAGAACATCATTCCTTAAATGATGTGACAATTTCTAATATGTCTGCAAGATAA 2433 0.3983 MREKERENKISRILLLPLLLYLIIILLHHSEADDDIAIYGGQHAKDGNLTETCATRKYSYVMIAFLSTFGKGQTPQINLNGHGQCENGCTEMETDIRNCQKQGIKVMLSIGGGSMNYSLGSNDEAKILSDYLWNNFLGGSSLSRPFGSAVLDGIDFFVVRQTPYMESLAWHLKLHTSTQQAVYLSAAPYCPFPDLALGSALNDGLFDYVWVKFYDNPACSFSHGNYDNAMNIWNQWTKLPKGGKIYLGLQIYQKYTDYIPPDVLVSKILPMIKKSSNYGGVMLWSRYFDKKNGYSAYIQNYTVCTQQSLPRCNSHDSGFVKRFGSMSTPGIKVYDGENLGAHCCEIICRNNCSCEAYALSNNVNNTGCIIWGTGTSFITDSGETSQLIYVVKHEVVSGFLTSTFSNRRLRWLIIGVGAATIAIPVIFFYLCRALWRRYKAEVARKTMQKELIHEIGGNAMLSMVYGKITKSKNREKISNEVQMFNLESIAAATNSFSVANKLGEGGYGPVYKGTLRDGQEVAIKRLSKSSGQGLIEFKNEAKLMAKLQHTNLVKLLGFCIQRDERIIVYEYMSNKSLDLYLFDSTRKNLLDWEKRLNIIEGIAQGLLYLHKYSRLKVIHRDLKAGNILLDEEMNPKISDFGMARIFGLRVSQEKTNRVVVHAAEYAINGIVSIKTDVFSFGVLLLEILGGKKNNSCYDSNRPLSLIGYAWKLWIEGRALELVEQALNELSSQNEILKCIHIGLLCVQEQAKDRPTMLDIVSFLTNDTIQLPQPKQPAFFINVIAEESEVPYSRQEHHSLNDVTISNMSAR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5124 810 ProSiteProfiles Protein kinase domain profile. 496 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g5124 810 SMART serkin_6 496 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g5124 810 Coils Coil 719 739 - -
Lja3g5124 810 Pfam PAN-like domain 312 372 IPR003609 -
Lja3g5124 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 191 779 - -
Lja3g5124 810 Gene3D Phosphorylase Kinase; domain 1 460 571 - -
Lja3g5124 810 SUPERFAMILY (Trans)glycosidases 34 298 IPR017853 -
Lja3g5124 810 SUPERFAMILY Protein kinase-like (PK-like) 479 793 IPR011009 -
Lja3g5124 810 CDD GH18_hevamine_XipI_class_III 35 300 IPR045321 -
Lja3g5124 810 Pfam Glycosyl hydrolases family 18 39 289 IPR001223 GO:0005975
Lja3g5124 810 PANTHER OS01G0783800 PROTEIN 191 779 - -
Lja3g5124 810 Gene3D Transferase(Phosphotransferase) domain 1 572 774 - -
Lja3g5124 810 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 34 305 IPR001223 GO:0005975
Lja3g5124 810 ProSiteProfiles PAN/Apple domain profile. 312 394 IPR003609 -
Lja3g5124 810 Gene3D Glycosidases 34 302 - -
Lja3g5124 810 Pfam Protein tyrosine and serine/threonine kinase 498 763 IPR001245 GO:0004672|GO:0006468
Lja3g5124 810 Pfam Domain of unknown function (DUF3403) 765 810 IPR021820 GO:0004674
Lja3g5124 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5124 Lja-Chr3 93604342 93607588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5124 475 778 Receptor kinase-like Gene Family AT4G23230 55.844 7.88e-114 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g5124 PK_Tyr_Ser-Thr 1.1e-45 CL0016