Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4925 ATGTACTACAGTCTCTGTCACCAAACACAAAATCTAAGCATGAGTTCTTTTTCTTACTCTGCAATGGATTTGGTGTTCCCTCTGAAACCCCACACACTGATTCTCAATGCACCCTCTTCATCCCTCTTCCTCCCTCGCCGTCTTCCTGTAAAGTTCCGCTCTTTAAGCCCCCTCTGTGCTTCCAAGCATGTCAAGATTCAATGCGAGCTTGAAGGGAAGATCAATGGTGCCCTTTCTGGTGACTTGGACCCTCGCTTCATCGACAGGCAAAAAGCACTGGAAGCAGCGATGAATGATATAAACAACTCTTTTGGAAAGGGTAGTGTAACAAGATTGGGCAGTGCCGGTGGAGCTTTGGTTGAAACATTTCCCAGTGGCTGTTTGACTTTAGACTGTGCTTTAGGTGGCGGTCTTCCTAAAGGAAGAATTGTAGAGATATTTGGACCAGAAAGCAGTGGGAAGACCACCCTGGCACTTCATGCTATTGCGGAAGTGCAGAAACTAGGAGGCAATGCTATGCTTGTTGATGCAGAGCATGCTTTTGATCCAGCATATTCTAAAGCGTTAGGAGTGGATGTGGAAAATTTGATTGTGTGCCAACCGGATAATGGAGAGATGGCTCTTGAGATCGCAGATCGTATGTGTAGATCTGGTGCTGTAGATCTCATTTGTGTGGACTCAGTCTCTGCCCTCACTCCCCGTGCAGAAATTGAGGGTGAGATTGGAATGCAGCAAATGGGATTGCAGGCTCGTCTTATGAGTCAAGCTTTGCGTAAGATGTCTGGAAATGCCTCTAAAGCTGGTTGCACTCTTATATTTTTGAATCAAATAAGATACAAGATTGGTGTCTATTATGGAAATCCAGAAGTGACAAGTGGTGGAATTGCATTGAAGTTCTTCGCATCAGTTCGGCTAGAAGTTCGTTCTACAGGGAAGATAAAGTCTGCTAAAGGAGATGAAGAAATTGGTGTTAAAGTTCGTGTAAGAGTGCAAAAGAGCAAGGTATCAAGACCGTACAAACTAGCTGAATTTGAGATTATATTTGGAGAGGGAGTCAATAAGCTGGGTTGCATTTTAGATTGTGCGGAAATGATGGATATTGTCTTAAAGAAGGGATCTTGGTACAGCTATGGGGACCAACGGTTAGGACAGGGAAGGGACAAAGCAATACAATACTTGAATGAGAACCCACATCTTCTACACGAAGTTGAAAAGATAGTTCGTTCTTCATTGATTGATGGAACTAACCAAACAAGCCTGGGGTACATGAAGTTTAGTCCAACGCTCCATCAAGATGACGACGACACATTTGAGGAAGCTCAATGA 1326 0.4397 MYYSLCHQTQNLSMSSFSYSAMDLVFPLKPHTLILNAPSSSLFLPRRLPVKFRSLSPLCASKHVKIQCELEGKINGALSGDLDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEVRSTGKIKSAKGDEEIGVKVRVRVQKSKVSRPYKLAEFEIIFGEGVNKLGCILDCAEMMDIVLKKGSWYSYGDQRLGQGRDKAIQYLNENPHLLHEVEKIVRSSLIDGTNQTSLGYMKFSPTLHQDDDDTFEEAQ* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4925 441 Hamap Protein RecA [recA]. 89 414 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 SMART AAA_5 140 311 IPR003593 -
Lja3g4925 441 Gene3D - 118 417 IPR027417 -
Lja3g4925 441 TIGRFAM tigrfam_recA: protein RecA 88 408 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 CDD recA 88 411 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 PRINTS RecA protein signature 293 321 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 PRINTS RecA protein signature 210 239 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 PRINTS RecA protein signature 248 277 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 PRINTS RecA protein signature 176 205 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 PRINTS RecA protein signature 328 357 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 PRINTS RecA protein signature 382 399 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 Pfam recA bacterial DNA recombination protein 91 353 IPR013765 GO:0003697|GO:0005524|GO:0006281
Lja3g4925 441 ProSiteProfiles RecA family profile 2. 282 357 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lja3g4925 441 ProSitePatterns recA signature. 296 304 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Lja3g4925 441 PANTHER MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 85 419 - -
Lja3g4925 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 352 IPR027417 -
Lja3g4925 441 ProSiteProfiles RecA family profile 1. 119 277 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Lja3g4925 441 SUPERFAMILY RecA protein, C-terminal domain 354 409 IPR023400 -
Lja3g4925 441 PANTHER RECA 85 419 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4925 Lja-Chr3 91280864 91297012 Transposed