Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4897 ATGGCATTGAATTTCTGGTCACATCTTCTGCCACAGGCCTTTGCTGTTCTTTGTGCAGTGGCATCACCATTGCACCAAGTGCAGGGAAATGCTTTCCAAATCAACCAATTAAACCAACAAAAAGGGTGTGATTTTTCTCTTGGGAGGTGGATTCATGATCATGCCTCCTACCCTCTCTATGATGCTACACGTGATTGCCCCTTCATTGTTCAGGGATTTGATTGTCTCAAAAATGGTAGACCTGATAAGGAATACCTCAAATATAGATGGAAGCCTTCAGGTTGTGATCTTCCAAGGTTTGATGGTGTGAAATTCTTGGAGAGATACAAAGGGAAGAAGATCGTGTTTATTGGGGACTCCATAAGTGACAACATGTGGCAGTCACTTACTTGTTTGCTGCACATTGCAGTGCCAAAATCAAATTACACCTTAAGAAGACCAACAAAGTATCTTCATGTGTTCTCATTCCCGGAATACGAAGCTTCAATCTTGTGGTTGAAAGATGGGTACCTAGTGGATGTGATTCGTCATAAAGAACAAGGCAGAATTCTGAGACTGGACTCCATTACATCTGGGAACATGTGGAGAGGGGATGTTTTGATTTTCAACACCTACCATTGGTGGGTTCGTGAAGGAACATCTCAAACACACTTTCAAGTGGGTAATGAGATAATCAAGGACATGGATCCCTTGGAAGCTTACAAGATTGGGTTAACCACTTGGTCTAAGTGGATTGATTCTAACATTGATCCCTCAAAGACTACAGTTTTGTTCCAAGGAATTGCTGCTGCACATTCTGAGGGAAAGAGCTGTCTTGGACAAACTCAGCCAGAGCAGGGAGCAAAGCCACCTTATCCTGGTGTGGACATTGTGAGGAGCGTTTTGAGCAACATGAAAACTCCAGTTTATTTGCTTGACATTACTTTGCCTTCACAGCTGAGGATCGATGGCCACCCTTCTGTATATACAGGACGTGGCACTTCTTTTGAAGATTGCAGTCACTGGTGTCTTGCTGGTGTTCCTGATACATGGAATGAAATCTTGTATGCTGCTTTGCTTGGAAATTAG 1068 0.4307 MALNFWSHLLPQAFAVLCAVASPLHQVQGNAFQINQLNQQKGCDFSLGRWIHDHASYPLYDATRDCPFIVQGFDCLKNGRPDKEYLKYRWKPSGCDLPRFDGVKFLERYKGKKIVFIGDSISDNMWQSLTCLLHIAVPKSNYTLRRPTKYLHVFSFPEYEASILWLKDGYLVDVIRHKEQGRILRLDSITSGNMWRGDVLIFNTYHWWVREGTSQTHFQVGNEIIKDMDPLEAYKIGLTTWSKWIDSNIDPSKTTVLFQGIAAAHSEGKSCLGQTQPEQGAKPPYPGVDIVRSVLSNMKTPVYLLDITLPSQLRIDGHPSVYTGRGTSFEDCSHWCLAGVPDTWNEILYAALLGN* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4897 355 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 7 355 - -
Lja3g4897 355 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 97 350 IPR026057 GO:0016740
Lja3g4897 355 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 7 355 IPR029962 GO:0016413
Lja3g4897 355 Pfam PMR5 N terminal Domain 42 96 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4897 Lja-Chr3 91011877 91014677 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4897 3 91011877 91014677 Lja3g4897 3 91011877 91014677 ECH
Lja3g2918 3 51241564 51243643 Lja3g4897 3 91011877 91014677 PCT