Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4889 ATGGAATCTGTTAAGCCGTCAGCAGTGACACCAAGCAAGAGTAAATTGGCTCGCACATTTGCCAAGGTTCTTCATGTTAGAGCAGTCACTGGAATTGCAAAAGTAGATGGACTGAAGAATGTTAAACTTGATGCAAATCTCAACGTTGAAGGAAATATGGATAAGAGTACAATAAACAAAGAAGATGAAGAGCTTCAGAAAAGAGTGGTCATAGAAGCGCTGCTGGCGAAAGTTTTTGCAAGCATTTCAACTGTAAAAGCTTCATATGCTCAGCTTCAGTACGCCCAGTCTCCTTATGACCCTGATGGAATTCAAGCTGCAGATAAGTTCATAGTCTCGGAGTTGAAGACCTTGTCTGAGCTTAAGCAATGTTACTTTAAAGAACAATTTGATCCTTCACCAGATAGAGCGATTCTTGAAGCCGAAGCAAAAGAGCTGGAGAGTGTCATCAAAACTTATGGGATCATGGGGAAGAAGTTGGAATCGCAGGCGCGGCTGAGGGAGTCTGAGATTATGTATCTTAGGGAGAAGTTGGAGGAAGCTAATAAGCAGAACAAGTCAATTGAGAAGAAGTTAAATCAAAGTGGGTCATTATCTGTGCTTGATAATCTCCATGTTTCAGGTGTAAGTCCTAGCCATTTTGTTACTCTTCTTCGCCACGCAGTTAGATCCATTAGAAGTTTTGTGAAGTTGTTAGTGAATGAGATGAGATCTGCTGGTTGGGATATTGATGCTGCGGTCAATGCTATTGAGAAGAATGTGGTTTACTGGGAAGAAGATCACAAGTGTTTTGCAGTTGAGTCCTTTGTTTGCAGGGAGATGTTTGATTCTTTCAACTCTCCCAATTTCTCTCTTCCTAACGAGTCTCTGCCGGATGGAAGCAAGCGACAATTGTTCTTCGGGAGGTTCAGCGAGCTGAAATCCGTGAAAGCAAAGGAGTTTCTCGCCATGCAGCCGAGATCAACATTCGCGAAATTCTGCAGGATCAAGTACTTGAGACTAGTTCATCCCAAGATGGAGGCCTCGTTTTTCGGTAACCTGAGCCAGAGGAACCTGGTAAATGCTGGGGAATTTCCTGATACAAGCTTCTTCACATCGTTTGCTGAGATGGCAAAGCGAGTGTGGCTCCTGCATTGCTTGGCTTTCTCCTTTGAGCCTCAAGCATGTGTGTTTCAAGTGGGGAAGGGTTGCAGATTCTCTGATGTGTACATGGAGAGTGTGAATGATGAAATGCCAGTGGAATCTGAGCCACATGTTGCTTTCACTGTGGTTCCAGGGTTTAGGATTGGTAAAACATTTTTACAGTGCCAAGTTTACCTATCACAGCAGCACCAAGAAAAGGTAAAAAAATTCACTTCTGCAAAGCAAAGGTAG 1374 0.433 MESVKPSAVTPSKSKLARTFAKVLHVRAVTGIAKVDGLKNVKLDANLNVEGNMDKSTINKEDEELQKRVVIEALLAKVFASISTVKASYAQLQYAQSPYDPDGIQAADKFIVSELKTLSELKQCYFKEQFDPSPDRAILEAEAKELESVIKTYGIMGKKLESQARLRESEIMYLREKLEEANKQNKSIEKKLNQSGSLSVLDNLHVSGVSPSHFVTLLRHAVRSIRSFVKLLVNEMRSAGWDIDAAVNAIEKNVVYWEEDHKCFAVESFVCREMFDSFNSPNFSLPNESLPDGSKRQLFFGRFSELKSVKAKEFLAMQPRSTFAKFCRIKYLRLVHPKMEASFFGNLSQRNLVNAGEFPDTSFFTSFAEMAKRVWLLHCLAFSFEPQACVFQVGKGCRFSDVYMESVNDEMPVESEPHVAFTVVPGFRIGKTFLQCQVYLSQQHQEKVKKFTSAKQR* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4889 457 Coils Coil 171 198 - -
Lja3g4889 457 Pfam Plant protein of unknown function (DUF641) 69 191 IPR006943 -
Lja3g4889 457 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 1 440 IPR040225 GO:0009639|GO:0009959
Lja3g4889 457 PANTHER OS01G0203800 PROTEIN 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4889 Lja-Chr3 90933839 90938663 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4889 3 90933839 90938663 Lja3g4889 3 90933839 90938663 ECH