Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4867 ATGTCAATGCTTTCTTTCAAGCCTTTCCTTGATCGTCGGGTCCAATCGTTCTTCCCAATTGTATTGTATTCAACTCTGATCTTAGGAGCTGCAAGGTTAGTCCTAGATAGTTTGAAGAGCAGCAATAGCCCTGTTTTCAAGCTCTATGGCATGTCACATGGTGGAAGGAATAGATTACCAGTTGTAGTGTTGCCAGAGGATCGCATTGAGGAAGATTGCAATGTGTTTGAAGGGACATGGGTGTGGGACAATGTGTCCTATCCTCTTTATGAAGAAGAGAGTTGCCCTTACTTGGTCAAGCAGACTACTTGTAAGAAGAATGGAAGGCCTGATTCTTACTATAGGAATTGGAGGTGGCAGCCTCATGGATGCAACCTTCCAAGATTTGACCCTTTGAAGTTGCTGCACGTGTTGAGGAACAAACGGATGATGTTCATTGGAGACTCATTACAAAGAGGCCAATTTGAGTCTATGGTCTGTTTGGTACAATCTGTAATTCCTGAAGGAAAGAAATCCCTCAAAAGAATTCCACCTATGAAAATCTTCAAAGCTGAGGAGTTCAATGCATCAATTGAATACTACTGGGCTCCATTCATCGTAGAATCCATTTCAGATCATGCAACAAATCATACAGTACATAAACGAATGGTGAGCCTGGACTCCATTGCTAACCATGGAAAACATTGGCAAGGAGTGGACATTTTGGTGTTCGAAAGTTATGTTTGGTGGATGCACAAGCCTTTCATCAATGCTACATATGGATCGCCACACCATGTCAAAGAATATAATGTCACCACAGCATACAGATTGGCTTTGGATACATGGGCAAATTGGTTAGAATCAAACATCAAACCACTTACTCAGAAGGTCTTTTTCATGAGTATGTCTCCAACACATCTGTGGAGCTGGGAATGGAAGCCAGGAAGTGATGAAAATTGCTTCAATGAGTCATACCCTATTCAAGGTCCATATTGGGGCACAGGCTCAAATCTTGAGATAATGAAGATACTAAATGATGTGCTACAAGAACTGAAAATAGATGTCACCTTGCTGAACATAACCCAACTATCAGAGTACAGACAAGATGCTCACACATCAGTTTATGGGGAGAGAAAAGGCAAGCTCTTGACAAAAGAACAGAGAGCCAATCCAAAGTCCTTTGCTGATTGCATTCATTGGTGCTTACCTGGAGTCCCTGATGCATGGAATGAAATCCTATATGCATATCTTTTTAAGAATTATAAAAACCTCTCTTGA 1257 0.4129 MSMLSFKPFLDRRVQSFFPIVLYSTLILGAARLVLDSLKSSNSPVFKLYGMSHGGRNRLPVVVLPEDRIEEDCNVFEGTWVWDNVSYPLYEEESCPYLVKQTTCKKNGRPDSYYRNWRWQPHGCNLPRFDPLKLLHVLRNKRMMFIGDSLQRGQFESMVCLVQSVIPEGKKSLKRIPPMKIFKAEEFNASIEYYWAPFIVESISDHATNHTVHKRMVSLDSIANHGKHWQGVDILVFESYVWWMHKPFINATYGSPHHVKEYNVTTAYRLALDTWANWLESNIKPLTQKVFFMSMSPTHLWSWEWKPGSDENCFNESYPIQGPYWGTGSNLEIMKILNDVLQELKIDVTLLNITQLSEYRQDAHTSVYGERKGKLLTKEQRANPKSFADCIHWCLPGVPDAWNEILYAYLFKNYKNLS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4867 418 Pfam PMR5 N terminal Domain 72 125 IPR025846 -
Lja3g4867 418 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 31 12 412 - -
Lja3g4867 418 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 12 412 IPR029962 GO:0016413
Lja3g4867 418 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 126 408 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4867 Lja-Chr3 90769478 90772750 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4867 3 90769478 90772750 Lja3g4867 3 90769478 90772750 ECH