Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4828 ATGTCATCCTCCACCGCCACTCCTCCCACCAAAACCCCATCGGACAAATCATCCCGCCGGAGACATCGCCCCGATTCCACGTCTCGATTTGAGGCCTACAACCGCCTCCAAGCCGCCGCCGTAGCCTTCGGCGAAACACTCCCAATCCCGGAGATCGTCGCCGTCGGTGGCCAATCCGATGGCAAAAGCTCCCTCCTCGAAGCCCTCCTCGGGTTCCGCTTCAATGTCCGCGAGGTCGAGATGGGCACTCGCCGCCCCCTTATCCTCCAAATGCTCCATGATCCCTCCGCCGCAGAACCTCGCTGCCGCTTCCAGGAGGAAGATTCAGAAGAGTATGGAAGTCCTGTGGTTTCTGCTTCTACCATTGCTGACATTATCAAGTCTCGAACCGAGGCGCTTTTGAAGACGACGAGGACCGCGGTTTCCCCGAAGCCGATTGTGCTGAGAGCTGATTACGCGCATTGTCCTAATCTCACGATTATCGACACGCCGGGGTTTGTTCTCAAGGCGAAGAAGGGTGAACCGGAGAGCACGCCTGAGGAGATTCTTTCGATGGTGAAGTCATTGGCTGCTCCTCCACACCGCATTATCTTGTTCCTTCAGCAGAGTAGTGTTGAGTGGTGCTCCTCATTGTGGTTGGATGCGGTTCGCGAAATTGATCCCACGTTTAGACGGACGGTTGTTGTTGTATCTAAATTTGATAATCGACTCAAGGAATTTAGTGACCGGTGGGAAGTAGATCGCTATTTGAGTGCAAGTGGATACCTTGGAGATAGCACTCGCCCTTATTATGTGGCCCTGCCTAAGGACAGAACCAATGTTTCGAATGAGGAGTTCCGTAGACAGATTTCTCAGGTGGACTCGGAGGTTATTCGTCATCTTCGTGAGGGTGTCAAGGGAGGTTTCGATGAAGAAAAGTTCAAGTCCTATGTTGGTTTTGGCCGTCTGAGGGATTATTTGGAGTCTGAGCTACAGAAGAAATACAAAGAAGCTGCGCCTGCAACTCTTGCATTGCTTGAGCAACGGTGTGGTGAAATCACTTCTGAGCTTGCCGGACTGGATTCAAAGCTACAGGCCACTTCAGATATTTCTCATCTTAGGAAATTCGCAATGCTGGATGCAGCTTCTATCAGCAACCATGTGGGTGCATTGATTGATGGTGCAGCGGATCCTTGCCCTGAGCAGTGGGGGAAAACAACAGTACAAGAGAGGTCAGAAAGTGGTATTGGGGTTTGGCCTGGTGTCATTACGGATGTAAATCCCCCCAATGCTACCCTTCGCCTTTATGGAGGGGCTGCATTTGAGAGGGTGATGCATGAATTTCGTTGCGCTGCATATTCCATTGAATGCCCCCCGGTGTCACGGGAGAAGGTAGCAAATATATTACTTGCCCATGCTGGCCGAGGTGGGGGAAGAGGACTAACAGAGGCTGCTGCAGAGATTGCACGTGCTGCTGCTAGATCATGGCTTGCTCCTCTTCTTGATACTGCTTGTGATCGGCTTGCTTTTGTTTTAGGAAGTTTATTTGATTTGGCTCTAGAAAGAAACCGCTGTCGTGATTCACAATATGGGATTAAATCAGGAAACATGGATGGCTATGTTGGTTTTCATGCTGCTTTACGGTGTGCATACAGTCGTTTCATAAAGGATCTCACTAAACAGTGCAAGCAGCTTGTGAGGCACCACCTTGATTCAGTTACCAGTCCATACTCACAGGTCTGCTACTTCAATGAATTCCAACCCAGTTCTGGCCAAAATGCTGCCACTTTCAACAAATTCAGCCAGGCTTTCCTTGATTTGAGCGACACGAGTTCAGCTTCCAATCATGATGCAATGAGGGATCAGGAAAACATACCTCCAGAAAATAATAACATGCAGGAAACCACACCGGGTAAAGCTGCAGCAGAAGCTAGAGACGCTTTGCGAGAAAGCCAAATGACTATCCCTGAGACCCCATCTCCTGATCAGCCAGGTGATCCAAAAAAGAGGGAGCTTGGAATTTGTAATGACCTTGGACCGAGGAAGAGGGTCTCCAGAATGGCAGGAAATGGAAAAAATTCTGAGTATATTAGGCCGCAAAATGGGGGCATTTTGTTTGGAAATGGGGAGAGATCAGGTTCACCTTACTCAGAAATCTGTTTATCAGCTGCCCAGCATTTTGCACGTATACGTGAAGTTCTTGTTGAGAGAGGCGTGACATCAACCATGAACTCTGGATTCCTAACCCCTTGCCGAGAGGGACTTCTCGTGGCTCTCATGTTAGATTTATTTGCTGTGAATGATGAGAAATTCATGGACATGTTTGTTGCTCCGGGCGCCATAGATGTTCTGCAAAATGAACGAGAGTCTCTAACAAAGCGTCAGAAGACACTCCAGTCTTGCTTGAATGAGTTTAAAAATGTTGCTCGAGCTCTTTGA 2418 0.4909 MSSSTATPPTKTPSDKSSRRRHRPDSTSRFEAYNRLQAAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMLHDPSAAEPRCRFQEEDSEEYGSPVVSASTIADIIKSRTEALLKTTRTAVSPKPIVLRADYAHCPNLTIIDTPGFVLKAKKGEPESTPEEILSMVKSLAAPPHRIILFLQQSSVEWCSSLWLDAVREIDPTFRRTVVVVSKFDNRLKEFSDRWEVDRYLSASGYLGDSTRPYYVALPKDRTNVSNEEFRRQISQVDSEVIRHLREGVKGGFDEEKFKSYVGFGRLRDYLESELQKKYKEAAPATLALLEQRCGEITSELAGLDSKLQATSDISHLRKFAMLDAASISNHVGALIDGAADPCPEQWGKTTVQERSESGIGVWPGVITDVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGLTEAAAEIARAAARSWLAPLLDTACDRLAFVLGSLFDLALERNRCRDSQYGIKSGNMDGYVGFHAALRCAYSRFIKDLTKQCKQLVRHHLDSVTSPYSQVCYFNEFQPSSGQNAATFNKFSQAFLDLSDTSSASNHDAMRDQENIPPENNNMQETTPGKAAAEARDALRESQMTIPETPSPDQPGDPKKRELGICNDLGPRKRVSRMAGNGKNSEYIRPQNGGILFGNGERSGSPYSEICLSAAQHFARIREVLVERGVTSTMNSGFLTPCREGLLVALMLDLFAVNDEKFMDMFVAPGAIDVLQNERESLTKRQKTLQSCLNEFKNVARAL* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4828 805 MobiDBLite consensus disorder prediction 14 29 - -
Lja3g4828 805 Pfam Dynamin family 52 232 IPR045063 -
Lja3g4828 805 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 46 333 IPR030381 GO:0005525
Lja3g4828 805 PRINTS Dynamin signature 49 67 IPR022812 -
Lja3g4828 805 PRINTS Dynamin signature 152 169 IPR022812 -
Lja3g4828 805 PRINTS Dynamin signature 74 91 IPR022812 -
Lja3g4828 805 PRINTS Dynamin signature 202 220 IPR022812 -
Lja3g4828 805 PRINTS Dynamin signature 221 237 IPR022812 -
Lja3g4828 805 PANTHER DYNAMIN 26 804 IPR022812 -
Lja3g4828 805 MobiDBLite consensus disorder prediction 604 630 - -
Lja3g4828 805 PANTHER DYNAMIN-LIKE PROTEIN C 26 804 - -
Lja3g4828 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 341 IPR027417 -
Lja3g4828 805 Gene3D - 17 384 IPR027417 -
Lja3g4828 805 SMART dynamin_3 26 269 IPR001401 GO:0003924|GO:0005525
Lja3g4828 805 MobiDBLite consensus disorder prediction 604 668 - -
Lja3g4828 805 MobiDBLite consensus disorder prediction 1 29 - -
Lja3g4828 805 CDD DLP_1 47 333 IPR001401 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4828 Lja-Chr3 90299000 90305364 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4828 3 90299000 90305364 Lja3g4828 3 90299000 90305364 ECH