Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4738 ATGTCCTGTTGCAGCAGTTTCAGGTTATTCAGAATCCAGAACCTTCGTCTCTCTCAACTTCTCACTCCACCAAAAACCCCACTCACAACCCTTTCTTCTTCATCTTCATTGATCACACTGAGAGCTAGAGCAACATCACTCACCGCGAAAGCTTCGTTATCATCATCAGCGTCGACGGAAATGGTGAAAGCTATCAGAGTTCATGAACTCGGTGGCCCCCAGGTTCTGAAATGGGAGGATGTGGAAATCGGAGAACCCAAAGAAGGTGAAGTGCGTGTGAAGAACAAAGCAATCGGGGTCAATTTCATTGATGTTTACTTTCGGAAAGGGGTTTACAAAGCCTCATCAACACCCTTCACTCCAGGTATGGAGGCTGTTGGAGTTGTGACTGCTGTGGGTGGAGGACCCACGGGTGTGCAGGTTGGGGATCTTGTTGGTTATGCTGGTCAACCAATGGGTTCCTATGCTGAGGAGCAGATTCTTCCTGCTGCTAAAGTTGTTCGTATTCCTTCCTCAGTTGACCCAACTATTGCTGCATCGGTGATGCTCAAGGGCATGACTGCTCAATTTCTGCTTCGCCGTTGTTTCAAGGTTGAACGTGGTCACACAATTCTTGTCCATGCAGCTGCTGGTGGAGTTGGATCCCTATTGTGCCAGTGGGCAAATGCTCTGGGTGCAACTGTTATAGGAACTGTATCCAATGAGGAGAAGGCAGCTCAAGCCAAGGAGGATGGCTGTCATCATGTTATAATCTACAAAGAAGAGGATTTCGTTGCTCGCGTCAATGAAATTACATCAGGCAATGGAGTTGAAGTGGTCTATGATTCTGTGGGAAAAGATACCTTTGAGGGATCCTTAGCATGCTTGAAGCAACGAGGCTACATGGTGAGTTTTGGGCAATCATCTGGTTCACCTGATCCAGTCCCATTATCCTCCCTTGCTGCAAAATCCCTGTTCCTGACAAGGCCCAGCCTAATGCAATATGTTGTCACTCGGGATGAGCTATTGGAGGCTGCAGGAGAGTTGTTTGCTGCTGTTGCATCTGGTGTCTTGAAGGTGAGGGTCAATCATACTTACCCATTGTCTGAGGCTGCAAAAGCACATGAAGACCTGGAGAATAGGAAGACCTCAGGATCTGTTGTGTTGATACCCTAA 1155 0.4771 MSCCSSFRLFRIQNLRLSQLLTPPKTPLTTLSSSSSLITLRARATSLTAKASLSSSASTEMVKAIRVHELGGPQVLKWEDVEIGEPKEGEVRVKNKAIGVNFIDVYFRKGVYKASSTPFTPGMEAVGVVTAVGGGPTGVQVGDLVGYAGQPMGSYAEEQILPAAKVVRIPSSVDPTIAASVMLKGMTAQFLLRRCFKVERGHTILVHAAAGGVGSLLCQWANALGATVIGTVSNEEKAAQAKEDGCHHVIIYKEEDFVARVNEITSGNGVEVVYDSVGKDTFEGSLACLKQRGYMVSFGQSSGSPDPVPLSSLAAKSLFLTRPSLMQYVVTRDELLEAAGELFAAVASGVLKVRVNHTYPLSEAAKAHEDLENRKTSGSVVLIP* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4738 384 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 61 383 - -
Lja3g4738 384 Gene3D - 71 378 - -
Lja3g4738 384 PANTHER ALCOHOL DEHYDROGENASE SUPERFAMILY, ZINC-TYPE-RELATED 61 383 - -
Lja3g4738 384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 335 IPR036291 -
Lja3g4738 384 Gene3D - 184 328 - -
Lja3g4738 384 SUPERFAMILY GroES-like 61 205 IPR011032 -
Lja3g4738 384 SMART PKS_ER_names_mod 71 382 IPR020843 GO:0016491
Lja3g4738 384 Pfam Zinc-binding dehydrogenase 212 320 IPR013149 -
Lja3g4738 384 CDD QOR2 63 384 - -
Lja3g4738 384 Pfam Alcohol dehydrogenase GroES-like domain 89 147 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4738 Lja-Chr3 89438877 89441976 Proximal