Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4731 ATGGATTACGAACCCTATGACAGTAGTGGAACTGATGATGATCTTCCGCCAACACATCAAAATAGAATTCCTAGGGGGGGACGTCTTGCTGGGAATGGAAGACCTGCTGTTGGTTCAGTTCCATACCCTAGGATGTTTGATGGAATTGATATGGAAGCCCAAATTCATCAACTTGAGCAGGAAGCGTACAGTTCAGTTCTTAGAGCCTTTAAAGCTCAAGCTGATGCCATTTCTTGGGAGAAAGAAAGTTTGATTACAGAGCTGAGAAAAGAACTGAGACTTTCAAATGAGGAACACAGACAACTTCTAGGCCAGGTTAATGCAGATGACATGATACGAAGGATAAGGGAATGGAGGCGGGTAGGTGGCCATCAGCCTGGCATGCTGATTACTGGTCAAGCGCTTCATGATTCTATTCCTAGTCCGACGGTCTCTGCATCTCTCAAAAAACAGAAGATTGCACCATCTGTACCATCACGTTCTTTTAGTGGGCCTTCTCCCCCATTTCACCCCCCAAAATTGACTGCACCCCATCAGCCGTCTTCTTCTGCAGCAGCAAAACGAGGATCTGTTCCTGGATCAAAGGCAAAGAAGCAAAAACCTGGTCAAATATTACCTGGTGTATCTTCAATGAAGCAGCATCCTTCCTCAGGTTCAGGTGGAAGGAATCAAGTACCAAATAGAGCTGTCATAGGTGAGCTTGCTGAAGGAGCGTCAATTGATTCGTTGATTGGTAGGAGAGTGCGGACAAGATGGCCTGATGACAATAACTTCTATGAAGCTGTTATCACTGACTACAATCCAGTTGATGGACTACATAATCTGGTCTATGACATGGGAAGTGCAAATGAAACATGGGAATGGGTTAATTTGTCAGAGATATCTGCTGAAGATATACAGTGGGTAGGTGAGGATCCTGGAATTAATCATCGAGGGAGTTTAAGGGCCTCTGGTCATGGGAGGAATAGGTCTATGGGGCGTGATAATGCTCCTGGAGCTGGAAGAGGTAGAGGAGTTGTGAAGGGGCAATCTAAAAAAGAGCTTTTGTCATCACAGAATGGCACGGGAAAGAAGGTTCCTGAAGATATAAAAATACTTCACACAGAGACACTAATCAAGGAGGTGGAGAGGGTATTCAGTGCAAATCATCCTGATCCCCTTGAAATTGAGAAAGCCAAGAAAGTATTAGGGGATCATGAACAAGCTCTTCTCGATGCAATTGCAAGACTTGGTGATCTTTCTGATGGGGAAAGCGGTACTTCTATGTTTTCTTGTTATTGCATAGTGTGTGCTTTGTCTTTTCCTATGTAG 1311 0.4439 MDYEPYDSSGTDDDLPPTHQNRIPRGGRLAGNGRPAVGSVPYPRMFDGIDMEAQIHQLEQEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEHRQLLGQVNADDMIRRIREWRRVGGHQPGMLITGQALHDSIPSPTVSASLKKQKIAPSVPSRSFSGPSPPFHPPKLTAPHQPSSSAAAKRGSVPGSKAKKQKPGQILPGVSSMKQHPSSGSGGRNQVPNRAVIGELAEGASIDSLIGRRVRTRWPDDNNFYEAVITDYNPVDGLHNLVYDMGSANETWEWVNLSEISAEDIQWVGEDPGINHRGSLRASGHGRNRSMGRDNAPGAGRGRGVVKGQSKKELLSSQNGTGKKVPEDIKILHTETLIKEVERVFSANHPDPLEIEKAKKVLGDHEQALLDAIARLGDLSDGESGTSMFSCYCIVCALSFPM* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4731 436 Coils Coil 85 105 - -
Lja3g4731 436 Pfam ENT domain 53 120 IPR005491 -
Lja3g4731 436 MobiDBLite consensus disorder prediction 161 175 - -
Lja3g4731 436 SMART ENT_2 51 124 IPR005491 -
Lja3g4731 436 MobiDBLite consensus disorder prediction 136 160 - -
Lja3g4731 436 MobiDBLite consensus disorder prediction 131 226 - -
Lja3g4731 436 SUPERFAMILY ENT-like 46 148 IPR036142 -
Lja3g4731 436 MobiDBLite consensus disorder prediction 209 224 - -
Lja3g4731 436 MobiDBLite consensus disorder prediction 1 36 - -
Lja3g4731 436 MobiDBLite consensus disorder prediction 313 355 - -
Lja3g4731 436 PANTHER PROTEIN EMSY-LIKE 3-LIKE ISOFORM X2 1 422 - -
Lja3g4731 436 Gene3D - 243 296 - -
Lja3g4731 436 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 51 138 IPR005491 -
Lja3g4731 436 PANTHER PROTEIN EMSY-LIKE 4 1 422 IPR033485 GO:0050832
Lja3g4731 436 SUPERFAMILY Tudor/PWWP/MBT 242 282 - -
Lja3g4731 436 Gene3D ENT domain 46 159 IPR036142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4731 Lja-Chr3 89395322 89401259 Wgd