Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4678 ATGGAGGATGAGAAGAAGAACACCACTGGTACTGGTGCTGGAGGGTTGCCAGTGAAGGTGGAACCAAAACCCAGTAATGGTTTCACTTCAAAAGTGATTGATTTGTTGGAGAAGCTGGTTGTGAAATGCTTTTATGATTCTTCACTGCCCCATCATTGGCTTGCTGGTAATTTTGCTCCAGTTCATGATGAGACTCCTCCTACTAAGAATCTTCCTGTCAGAGGGTTCCTACCGGATTGCTTGAATGGAGAGTTTGTCAGGGTGGGACCTAATCCGAAGTTTGCTCCTGTGGCTGGATATCACTGGTTTGATGGAGATGGAATGATTCATGGTTTGCGAATCAAAGATGGAAAAGCCTCATATGTTTCTCGTTTTGTGAGAACTTCTCGTCTTAAACAAGAAGAATACTTTGGAGGCTCTAAATTTATGAAGATTGGAGATCTCAAGGGTCTATTTGGACTGCTAATGGTTAACATGCAAATGTTGAGAACTAAATTGAAAGTACTGGATGGTTCATATGGACATGGAACAGCTAATACAGCTCTTGTTTATCACCATGGGAAGCTTCTAGCACTCTCGGAAGGAGATAAACCTTATGCTATTAAAGTTTTTGAAGATGGTGATTTGCAGACACTTGGCCTGCTAGATTATGACAAGAGATTGGACCATTCCTTCACTGCTCATCCAAAAGTTGACCCATTTTCTGGGGAGATGTTTACATTTGGTTATTCACATACACCGCCATATGTCACATACAGAGTAATTTCAAAGGATGGTTTTATGCATGACCCTGTACCTATAACAGTATCAGACCCCATCATGATGCATGATTTTGCCATCACAGAGAACTACGCCATCTTTATGGATCTTCCTCTGTACTTTAGACCAAAGGAAATGGTGAAAAATAAAACACTGATATTCTCCTTTGATTCAACCAAGAAAGCTCGCTTTGGTGTCCTACCTCGGTATGCTAAGGATGATAAGCAAATTAGATGGTTTGAGCTACCAAACTGCTTCATATTCCACAATGCCAATGCTTGGGAGGAGGAGGATGAAGTTGTTTTGATCACATGTCGCCTTGAGAATCCAGAGTTGGACAATGTTGGCGGGGCTGTCAAGGAAAAGCTCGAAAGTTTCTCAAATGAGCTGTATGAAATGAGGTTTAACATGAAAACGGGTGAAGCTTCTCAACAGAAACTATCAGCATCTACAGTAGATTTTCCTAGGGTGAATGAAAGCTACACTGGCAGGAAACAGCGATATGTATATGGAACTATATTAGACAGCATTGCAAAAGTTACCGGGGTTGTTAAATTTGATTTGCATGCCAAACCGGATTCTGGAAAAACAAAGCTTGAAGTTGGAGGAAATGTTCAGGGTCTCTATGACTTGGGACCAGGGAAGTTTGGATCTGAGGCTGTTTATGTCCCACGTGTCCCTGGCACCGATTCTGAAGAAGATGATGGATACTTGATCCTATTTGCACATGATGAGAATACCGGCAAATCATTCGTGCATGTCATCGATGCAAAAACAATGTCAGCAGATCCTATTGCAGTTGTAGAATTGCCGCATAGAGTTCCATATGGTTTCCACGCCTTCTTTGTGACAGAGGATCAACTGCAAGAACAGGCCAAACTGTGA 1644 0.4197 MEDEKKNTTGTGAGGLPVKVEPKPSNGFTSKVIDLLEKLVVKCFYDSSLPHHWLAGNFAPVHDETPPTKNLPVRGFLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLKVLDGSYGHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSFTAHPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFHNANAWEEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSASTVDFPRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQGLYDLGPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHVIDAKTMSADPIAVVELPHRVPYGFHAFFVTEDQLQEQAKL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4678 547 PANTHER BETA-CAROTENE DIOXYGENASE 6 543 IPR004294 GO:0016702
Lja3g4678 547 Pfam Retinal pigment epithelial membrane protein 58 536 IPR004294 GO:0016702
Lja3g4678 547 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 1-3 6 543 - -
Lja3g4678 547 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4678 Lja-Chr3 88798836 88806218 Dispersed