Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4671 ATGGGTGCGGCCTGTTGTGTTGCAGCCAAAGATAAAACTATACAAAGCGGTCCAACCAGTGAAATCTTGCAACGGAATATTCGATGTTCCCCGACATGGAGCTTCCGGTGGGATCATCGAGGTCGTGTTGCTGGTGAAGATACTTCTATAAATTGGTTTTCTGATGGTATTAACAGGAATGACAGATTGGAGAATAAAAATGAATCATCATATGCATCAGAGGATGGAAGCCCCTTGCAGAATTATCAAAGGAATAGATGGCAGAAATCCCCAATCTCTGAAGGAACTGCTGGACACGGGATAAATTATTCTTCTGATCAATCTATTTCAAGAAACGTTTCCATGGATGTGAGCATTGAACAGGGGAAGCAGTTGGTAGAACCATCCTCAGTATCATGTTCTTCTCCCACAAAACATTCACATTCATTGCCTTCAACTTCATTGTCAGTATCTCCTCTGCCATCCCCTAGTCACCTGCCTCCATCCAGCTCAACATCATTAAAGCCTTGCCACTCCTCAGGACACCAATTTTTACGGCAAGCTTCTGATAGCAGAGTCCTGGGATTTAAGACACCTAGCAAGTTTGATGTATCTGAAGAAAGGGCAGTGCTTCCTTCATGGAGCAATGAATCTCGCATGCACACCCTTGGTGGATCTTCTGAAAATTGGTCTAGGCCTGGCTTTTCTGAGCTGATGGCCATTTCACATATGGAAAGATGGTCAGTTGATCGTCAGTCTTTTGGTTTAAACTGTGGAAGATTGGGTAAATCCAGTGGTCGGTTCTCAACTTCTCCTGTTGATTTGCAAACATGTGGCATTTGCTCAAACCTTTTAACTGAAAAGTCTTCTTGGAGCACTCAAAAGATTATTGCGAGTAATGACCTTTCTGTAGTTTCTGTTCTTGTTTGTGGACATACCTATCACTCTGAATGTTTGGAAAGTATGACACCTGATATCAGTAAGTATGACCCAGCTTGCCCAGTTTGCACTTACGGCGAGAAACAAACTCTTAAGTTGTCTGAAAAAGCTCTGAAAGCTGAAATAGAATTGAGGGCTAGAAATAAGAAATCAAGGAACCGAATTGTGGACAGTGATATTGATGATGATTATGTTGTGTTTGATAACTTCAAAGATAGAGGGTGCCAAAGTAAAGGTCCTAGAATGGAGTGTAGTTCGAGTGGGAGAAGCTCTACTGGGAAACCTTTTCTGAAGAGACACTTCTCATTTGGCTCCAAGGGTTCCAAATGCATGTTAGATAATCACCCAACACGAAAGAAGGGCTTATTTTGGGCAAAGTCTAGCAAGGAATAG 1311 0.4233 MGAACCVAAKDKTIQSGPTSEILQRNIRCSPTWSFRWDHRGRVAGEDTSINWFSDGINRNDRLENKNESSYASEDGSPLQNYQRNRWQKSPISEGTAGHGINYSSDQSISRNVSMDVSIEQGKQLVEPSSVSCSSPTKHSHSLPSTSLSVSPLPSPSHLPPSSSTSLKPCHSSGHQFLRQASDSRVLGFKTPSKFDVSEERAVLPSWSNESRMHTLGGSSENWSRPGFSELMAISHMERWSVDRQSFGLNCGRLGKSSGRFSTSPVDLQTCGICSNLLTEKSSWSTQKIIASNDLSVVSVLVCGHTYHSECLESMTPDISKYDPACPVCTYGEKQTLKLSEKALKAEIELRARNKKSRNRIVDSDIDDDYVVFDNFKDRGCQSKGPRMECSSSGRSSTGKPFLKRHFSFGSKGSKCMLDNHPTRKKGLFWAKSSKE* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4671 436 MobiDBLite consensus disorder prediction 123 153 - -
Lja3g4671 436 ProSiteProfiles Zinc finger RING-type profile. 271 330 IPR001841 -
Lja3g4671 436 SMART ring_2 271 329 IPR001841 -
Lja3g4671 436 MobiDBLite consensus disorder prediction 123 175 - -
Lja3g4671 436 PANTHER BNAA09G43140D PROTEIN 1 430 - -
Lja3g4671 436 MobiDBLite consensus disorder prediction 64 83 - -
Lja3g4671 436 SUPERFAMILY RING/U-box 270 331 - -
Lja3g4671 436 Pfam Zinc finger, C3HC4 type (RING finger) 271 329 IPR018957 GO:0046872
Lja3g4671 436 MobiDBLite consensus disorder prediction 160 175 - -
Lja3g4671 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 331 IPR013083 -
Lja3g4671 436 MobiDBLite consensus disorder prediction 384 403 - -
Lja3g4671 436 CDD RING-H2 271 329 - -
Lja3g4671 436 PANTHER EXPRESSED PROTEIN 1 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4671 Lja-Chr3 88732708 88737521 Dispersed/Transposed