Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4663 ATGGCTTCATTGAAACTGCCTCAGGTTGTTCCTTCTCCTACACAAGATAGTGAACGAATTCGAAAGGCTTTCCAAGGGTTTGGGACAGATGAGAAGGAGATAATCTTGGTGTTAGGACACAGGAATGCCCAACAAAGGAAGGAAATCAGAGAAACTTATCAGCAGCTTTACAATGAATCACTCATTGATAGTCTCAAGTCTGAACTTTCTGGTGATTTCAGAAATGCTGTAATTCTCTGGACTTATGATCCAGCAGAAAGGCATGCAATACTAGCAAAGGATGCATTGAAGGCTAAGAAGATAGGGATTAAACAGTTACAGGTTCTAGTTGAAATAGCATGCACATCAACTCCTAATCATTTAATTGCTGTGAGGCAGAATTACTGCAATCTTTTTGATAGCTCACTTGAAGAGGACATTATAGCCTCAGTTTCTCAGCCCCTCAAAAAGCTCTTAGTGAGCTTAGTAAGCTCTTACAGGTATGATAAAGTAGCTGTAAACTTGGAGGTTGCCAAGTCAGAGGCATCAAGACTACAAGAAGCCATCAACAGTAAGCAATTAGATGATGATCACATTGTTTGGATACTTAGCACCAGGAATCTTTTCCAGCTCCGGGAAACTTTTGCATGCTACAAGCAACTCTATGGCAATACCTTGGAAGAGGGCATAAAAAGTTGTGGGAAGGGTGACTTGGAGTCTCTCTTACATTTGGTAGTACATTGCATTGACTTCCCCGAGAAACATTTTGCAAAGGTTGTAAGAGATTCTATTGTTGGGTTTGGAACTGATGAAGACTCCCTGAACAGAGCTATTGTAACTCGAGCTGAAATCGACCTGTTGAATGTCAGATTTGAGTATGCTAACATGTACAAGTGCAGTCTTGATGACGATGTCGATGGGGATACCTCAGGGGACTACCGAGAGTTTTTGCGGACTTTGCTAGGGAACGGTCCGAAGGGAGACTGA 966 0.4203 MASLKLPQVVPSPTQDSERIRKAFQGFGTDEKEIILVLGHRNAQQRKEIRETYQQLYNESLIDSLKSELSGDFRNAVILWTYDPAERHAILAKDALKAKKIGIKQLQVLVEIACTSTPNHLIAVRQNYCNLFDSSLEEDIIASVSQPLKKLLVSLVSSYRYDKVAVNLEVAKSEASRLQEAINSKQLDDDHIVWILSTRNLFQLRETFACYKQLYGNTLEEGIKSCGKGDLESLLHLVVHCIDFPEKHFAKVVRDSIVGFGTDEDSLNRAIVTRAEIDLLNVRFEYANMYKCSLDDDVDGDTSGDYREFLRTLLGNGPKGD* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4663 321 ProSitePatterns Annexin repeat signature. 261 313 IPR018252 GO:0005509|GO:0005544
Lja3g4663 321 Gene3D Annexin 168 243 IPR037104 GO:0005509|GO:0005544
Lja3g4663 321 Coils Coil 161 188 - -
Lja3g4663 321 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Lja3g4663 321 SUPERFAMILY Annexin 2 316 IPR037104 GO:0005509|GO:0005544
Lja3g4663 321 Pfam Annexin 175 236 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 Pfam Annexin 249 313 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 Pfam Annexin 105 155 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 Pfam Annexin 15 78 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 Gene3D Annexin 245 316 IPR037104 GO:0005509|GO:0005544
Lja3g4663 321 ProSiteProfiles Annexin repeat profile. 83 157 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 Gene3D Annexin 83 156 IPR037104 GO:0005509|GO:0005544
Lja3g4663 321 PANTHER ANNEXIN D3 7 316 - -
Lja3g4663 321 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Lja3g4663 321 PRINTS Annexin family signature 257 277 IPR001464 GO:0005509|GO:0005544
Lja3g4663 321 PRINTS Annexin family signature 301 314 IPR001464 GO:0005509|GO:0005544
Lja3g4663 321 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Lja3g4663 321 ProSiteProfiles Annexin repeat profile. 169 240 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 SMART annex3 107 155 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 SMART annex3 261 313 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 SMART annex3 188 238 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 ProSiteProfiles Annexin repeat profile. 244 315 IPR018502 GO:0005509|GO:0005544
Lja3g4663 321 PANTHER ANNEXIN 7 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4663 Lja-Chr3 88684198 88688431 Tandem