Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4660 ATGGCTACTCTCGTTGCTCCTATCAATCATTCTCCCCAAGAGGATGCAGAAGCTCTTTGGAAGGCCGTCAAAGGATGGGGGACTGATGAGAAGACCATCATTGCCATATTGGGTCATAGAAATGCTTCTCAAAGGCAGCAAGTCATACAAGCTTACCAGGACATTCACCAGGAGGATCTCATCAAACGGCTTGAATCTGAAATCTCCGGTGACTTTGAGAGAGCTCTGTACCGGTGGATATTGGAACCAGCAGAACGCTATGCAGTGTTGGCTAATGTAGCCATCAAGAGTGCCAACAATGACCACCATGTGATTGTGGAAATTGCATGTGTTCTTGAACCTGAAGAGCTTTTGGCTGTGAGGCATGCCTACCACAACCGCTACAAGCATTCTTTGGAAGAAGATGTGGCTGCTCATACCACTGGCCATCTTCGCCAGCTTTTGGTTGGATTGGTGAGCTCATTTAGATATGCTGGTGATGAGATCAATGCAAGGTTGGCAAAATCTGAAGCTGATATTCTTCATGAGGCAATCAAACACAAGAAAGGTACTAATCATGAAGAAATTATCAGGATCCTTACTACAAGGAGCAAGACTCAACTTGTGGCAACTTTCAACCGCTACAGAGATGACAATGGCATTTCCATCAGCAAGAAACTATTGGATGAAGCATCTGATGACTTCCTTAAGGCTGTACATGTTGCCATCCATTGTATTTATGACCCCAAAAAGTACTATGAAAAGGTTCTGCGCAATGCAATAGCCAGGGTTGGAACTGATGAGGATGGACTAACTCGTGTGTTTGTGACTAGAGCTGAGAAGGACCTGAAGGACATTAAAGAGCTGTATTACAAGAGAAACAGTGTTCATCTTGAGGATGCTGTGGCCAAAGAAATCTCAGGAGACTACAAGAAGTTCCTCCTCACTCTTTTGGGGAAAGAAGACTAA 948 0.4441 MATLVAPINHSPQEDAEALWKAVKGWGTDEKTIIAILGHRNASQRQQVIQAYQDIHQEDLIKRLESEISGDFERALYRWILEPAERYAVLANVAIKSANNDHHVIVEIACVLEPEELLAVRHAYHNRYKHSLEEDVAAHTTGHLRQLLVGLVSSFRYAGDEINARLAKSEADILHEAIKHKKGTNHEEIIRILTTRSKTQLVATFNRYRDDNGISISKKLLDEASDDFLKAVHVAIHCIYDPKKYYEKVLRNAIARVGTDEDGLTRVFVTRAEKDLKDIKELYYKRNSVHLEDAVAKEISGDYKKFLLTLLGKED* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4660 315 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Lja3g4660 315 PRINTS Plant annexin signature 160 180 IPR009118 -
Lja3g4660 315 PRINTS Plant annexin signature 226 244 IPR009118 -
Lja3g4660 315 PRINTS Plant annexin signature 118 132 IPR009118 -
Lja3g4660 315 SMART annex3 183 236 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 SMART annex3 258 310 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 Gene3D Annexin 82 152 IPR037104 GO:0005509|GO:0005544
Lja3g4660 315 Gene3D Annexin 165 240 IPR037104 GO:0005509|GO:0005544
Lja3g4660 315 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 ProSitePatterns Annexin repeat signature. 258 310 IPR018252 GO:0005509|GO:0005544
Lja3g4660 315 PRINTS Annexin family signature 254 274 IPR001464 GO:0005509|GO:0005544
Lja3g4660 315 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Lja3g4660 315 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Lja3g4660 315 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Lja3g4660 315 PRINTS Annexin family signature 174 200 IPR001464 GO:0005509|GO:0005544
Lja3g4660 315 PRINTS Annexin family signature 298 311 IPR001464 GO:0005509|GO:0005544
Lja3g4660 315 ProSiteProfiles Annexin repeat profile. 165 237 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 Gene3D Annexin 241 315 IPR037104 GO:0005509|GO:0005544
Lja3g4660 315 ProSiteProfiles Annexin repeat profile. 241 312 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 SUPERFAMILY Annexin 3 315 IPR037104 GO:0005509|GO:0005544
Lja3g4660 315 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 Pfam Annexin 92 151 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 Pfam Annexin 170 233 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 Pfam Annexin 248 310 IPR018502 GO:0005509|GO:0005544
Lja3g4660 315 PANTHER ANNEXIN 7 315 - -
Lja3g4660 315 PANTHER ANNEXIN 7 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4660 Lja-Chr3 88665478 88667742 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4169 3 81388598 81392304 Lja3g4660 3 88665478 88667742 PCT