Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4657 ATGACATGTTACTCACTTGTTCTTCTCATATTTTGCCTTTGTGGAGTTTCTCTCACGGAGTCTCTAAGAAATGGATTTAGTGTGGAACTTATTCACCGTGACTCTTCAAAATCACCATTTCATCGTCCTGCAGAAACTCACTTCCAACGAGTTTCCAATGTAGTGCGTCGTTCCTTCAACCGTGCCAATCATTTCAACAAAGCTTCTACTTCGAACCCCAAGAACACACCTAAATCAAATCATGTAATTCCTGATGATGGTGATTACATCATGAGTTATTCAGTTGGCACCCCAAAGTATCAGCTCTACGGTATCGTTGATACTGGTAGTGATCTTGTGTGGCTCCAATGCCAACCTTGTAAGTCATGTTACAACCAAACCACACCCATATTCGATCCTTCAAAATCCAAGACCTACAAAAACCTTCCTTGCTCCTCCTCGGTGTGTCAATCTGTGCCAGTTAGCACGTGTTCTTCTAATAATACTTGTAAATATACAGCTAACTATGGTGATGGGTCAAAGTCAGATGGAGATGTTAGTGTGGAGACTCTAACATTGGACTCCACGAGTGGCTCCCCAATCTCATTTCCAAAAATTGTGATTGGTTGTGGACATGACAATACCGGGTTGTTTCATGGAAGAGCCTCTGGCATAGTTGGGCTTGGGCGTGGATCTGTGTCTCTCACAACACAATTGGATACTTCAATTGGAGGAAAATTCTCCTATTGTTTGGTGCCTATGATTTCAGTGTCTGCTAACGCCTCAAGCAAACTCAATTTTGGTGATGTTGCTATCGTTTCCGGAAATAGAACTGTCTCAACTCCTATAATCCAAAACATTGATCTAATTCTAAATAACTTTTACGTCCTGAATTTGGAAGCATTTAGTGTGGGAGATAAGAAGGTAGATTTTGTGGACTCCCCATTTGGATCTAGTGGAGTAAATATTATAATTGACTCTGGCACTACATTGACACTTTTGCCTGATGATATCTATAAAACTTTAGAATCAGCGGTGTCAGAGGCGGTGGATATGAAGCCTATTGAGGATCCTGAATCAAAATTCAGTCTCTGCTATGAAGGTACACTAGATGATTTGATGGCTCCTATAATCACAGCTCATTTTAAGGGCGCTGATGTCCAATTAAGTTCTCTTAACACATTTTTTCAAGTTAGAGATCAGGTTGTGTGCTTTGCTTTTGCCTCGTCTAATAGTGTTGGTGTGGCCATCTTCGGGAATTTGGCGCAACAGAACTTCTTGGTTGGTTATGACTTGAAAAATAAAATTGTCTCTTTTAAGCCCACAAATTGTACCAATCAGTGA 1323 0.4067 MTCYSLVLLIFCLCGVSLTESLRNGFSVELIHRDSSKSPFHRPAETHFQRVSNVVRRSFNRANHFNKASTSNPKNTPKSNHVIPDDGDYIMSYSVGTPKYQLYGIVDTGSDLVWLQCQPCKSCYNQTTPIFDPSKSKTYKNLPCSSSVCQSVPVSTCSSNNTCKYTANYGDGSKSDGDVSVETLTLDSTSGSPISFPKIVIGCGHDNTGLFHGRASGIVGLGRGSVSLTTQLDTSIGGKFSYCLVPMISVSANASSKLNFGDVAIVSGNRTVSTPIIQNIDLILNNFYVLNLEAFSVGDKKVDFVDSPFGSSGVNIIIDSGTTLTLLPDDIYKTLESAVSEAVDMKPIEDPESKFSLCYEGTLDDLMAPIITAHFKGADVQLSSLNTFFQVRDQVVCFAFASSNSVGVAIFGNLAQQNFLVGYDLKNKIVSFKPTNCTNQ* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4657 440 Pfam Xylanase inhibitor C-terminal 288 433 IPR032799 -
Lja3g4657 440 ProSiteProfiles Peptidase family A1 domain profile. 89 433 IPR033121 -
Lja3g4657 440 SUPERFAMILY Acid proteases 84 437 IPR021109 -
Lja3g4657 440 CDD pepsin_A_like_plant 89 437 IPR034161 -
Lja3g4657 440 Gene3D Acid Proteases 261 440 IPR021109 -
Lja3g4657 440 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 316 327 IPR001969 GO:0004190|GO:0006508
Lja3g4657 440 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 5 438 - -
Lja3g4657 440 Pfam Xylanase inhibitor N-terminal 89 262 IPR032861 -
Lja3g4657 440 PANTHER OS07G0603500 PROTEIN-RELATED 5 438 - -
Lja3g4657 440 Gene3D Acid Proteases 63 260 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4657 Lja-Chr3 88648258 88649580 Dispersed/Transposed