Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4361 ATGTTTAATGAAGCTGTGAATGGATTTGCAGATGATGGCTGGTCCATGTTAGAGAGTGATGGCATTGATGATGTCACCCTTCTTGTGAATTCATCACCGAGCAAGATGATGGGTGCAAATCTTGGATATAACAATGGATTCCCATCCATGACCAGTTCTGTGCTATGTGCCAAAGCATCCATGTTGTTACAGAATGTCCCTCCAGCTATTCTTCTTAGATTCTTGCGGGAGCACCGATCAGAATGGGCAGATAGCAGTATTGATGCTTACTCAGCTGCTGCCATTAAAGCTGGCCCCTGTAGCTTGCCAGGGGCCAGAGGAAGTTTTGGGGGTCAGTTCATGGAGGTTATTAAGCTTGAAAACATGGGCTACTATCGGGACGACATGACTATGCCTGGTGATGTTTTCCTCTTGCAACTTTGCAGTGGAGTGGATGAGCATGCAGTTGGCACCAGTGCAGAACTAGTTTTTGCTCCAATAGATGCGTCTTTCTCTGATGATGCACCCATTTTACCTTCCGGTTTTCGTATTGTACCTCTTGATTCTGGCACGGCAAGTCTTTAG 564 0.461 MFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPSKMMGANLGYNNGFPSMTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGARGSFGGQFMEVIKLENMGYYRDDMTMPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIVPLDSGTASL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4361 187 SUPERFAMILY Bet v1-like 10 183 - -
Lja3g4361 187 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 2 183 IPR044830 GO:0003700
Lja3g4361 187 PANTHER BNAC03G66860D PROTEIN 2 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4361 Lja-Chr3 84584418 84585706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4361 2 187 Homeobox Transcription Factor Family AT4G32880 73.134 1.26e-96 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4361 K09338 - gmx:100815727 337.421