Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4274 ATGGTTAACGCCAAGCCTTCATCGAGAAGCGGCCCCAAACCCACTGAAAGAAATGAATACGTACCAACCTCCACAACAATTGAAGAGCTTGAGACAAAGATATGGAAAGATTGCATGTTGTTGAAGCAACTCAAGGAACAAAGGAAACAAAATAAGAGCAACAACACAATGAAGATTCTCAAAAGGAATACCATGTCTGATGCACAAGAGAACATCCTGAGACACATGCTGAAAATGATGGAGGATTGTGAAATTAGAGGATTCGTCTACGGCATCATCCCTGAAAGTGGCAAGCCGGTAAGCGGTTCCTCTGATAATCTTCGCGGCTGGTGGAAGGAGAGAGTGAGGTTCGATCACAATGGCCCCACCGCAATCGTTAAGTTTGAGGAAGAAAGTGCACATGACAAGGTGTACATGGCATCTCCTTACACTCTTCATGAGCTCCCTGACATAACTTTAGCGACACTCTTGTCAAGCCTCACACAACGATGTGAGCCACCTCAAAGGAAGTACCCATTGGAAAAAGGTATCCCCCCACCATGGTGGCCCACTGGGAAGGAACCATGGTGGCCTGAGTTGGGGTTTAGCAAGGATCCTGGCCCTCCTCCTTACAAGAAGCCTCATGATCTTAAAAAGGCATGGAAGGTGTGTGTGCTAACTGCTGTGATCAAGCACATTTCCCCTAACATTGACAAGATAAGGAACATTGTCAGGCATTCTAGGAACCTGCAGGACAAGCTCACTGCAAAGGAGAATGCTATTTGGATGGCTGTCTTGAACAATGAGGAGTCTCTGGCAAGAAAGCGTCACCCTGAAATGTTCCTGCCTAAGTCTCATGATGATGATGATGATGATGATGATGATGATGATGATGACGGCGATGATAGAAATAGCAGCTGCAGTGAGTTGGTTATGATAAATGATTATGATATTGGCATACAGAGCATTGGTGATTATAGAGAAGTTGTTGTGAAGTCTGGGGGAAAAAGACAAGCACCTGATGTGTCTCCATTGTACATGCCATCAACTGGAGCAAAAAGACAAACACCTGATGTGCATCCAATGTATAGGCCATCATCAAATAAGAGAAACCAACAAGAAGATGATTCTGTTCAGATAACTCCTCCTGTTCCTGAGAAGCAGCATGAGGCTTACACCATTAATCACTCTCAACACCAATATACTGATGTTGTTGGGTTCAATGAGATGAACCAGCTAAGTTTTACACAATCAAGCAACAACAACACACATGTCCAAATGGTTGGAGAGTCAAATACTCAGCCTATTAACAATGTCAATCCTCATGGTCAAACTACAGAACCATTTCTCGAATGGACTCTTCCTCCTCTCAGTTATTCAAAGGAAGTGACTTCTCAGCCAATGGAAATAGGCACTGCAGGGTTTCAAAACATGAATGGTGGAAGCATGAACAATCATACAGAACCAGTTGCAGTAGATCAAAGTAATCTTCCTCCTATCATTTATTCAGAAGTGAATTCTCAGTCTGTAGAAATATACACTGCAAGCTTTCAGAATACAATGAATGTTGCAGGAACCATGAATCCTGCTCATGTGGATAATCAATACCAACAGGTGCAAAATCTTCAGCCTCAGGTGGATAATAATAATCTCTTTGATCGAAGTGTTGCTAGTTTGAATGGCTACAATGATTACAACAACTTGCAAGCTGAAGTAGCCAACAATGTCCAAAAGGATACAAATGCAAATGTCACAGAAGCATCCATGGAGGATCCTCTTATTGATTTGCAGACATTTAATACCCAATATGATGGTGATGAATTCAACTATGCTTTTATTGACTCTCCCATTGTGGCAACACATAACTATGATTTCTCTTGGATGCACGATTAA 1872 0.4236 MVNAKPSSRSGPKPTERNEYVPTSTTIEELETKIWKDCMLLKQLKEQRKQNKSNNTMKILKRNTMSDAQENILRHMLKMMEDCEIRGFVYGIIPESGKPVSGSSDNLRGWWKERVRFDHNGPTAIVKFEEESAHDKVYMASPYTLHELPDITLATLLSSLTQRCEPPQRKYPLEKGIPPPWWPTGKEPWWPELGFSKDPGPPPYKKPHDLKKAWKVCVLTAVIKHISPNIDKIRNIVRHSRNLQDKLTAKENAIWMAVLNNEESLARKRHPEMFLPKSHDDDDDDDDDDDDDGDDRNSSCSELVMINDYDIGIQSIGDYREVVVKSGGKRQAPDVSPLYMPSTGAKRQTPDVHPMYRPSSNKRNQQEDDSVQITPPVPEKQHEAYTINHSQHQYTDVVGFNEMNQLSFTQSSNNNTHVQMVGESNTQPINNVNPHGQTTEPFLEWTLPPLSYSKEVTSQPMEIGTAGFQNMNGGSMNNHTEPVAVDQSNLPPIIYSEVNSQSVEIYTASFQNTMNVAGTMNPAHVDNQYQQVQNLQPQVDNNNLFDRSVASLNGYNDYNNLQAEVANNVQKDTNANVTEASMEDPLIDLQTFNTQYDGDEFNYAFIDSPIVATHNYDFSWMHD* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4274 623 MobiDBLite consensus disorder prediction 279 296 - -
Lja3g4274 623 MobiDBLite consensus disorder prediction 273 301 - -
Lja3g4274 623 MobiDBLite consensus disorder prediction 354 372 - -
Lja3g4274 623 MobiDBLite consensus disorder prediction 327 374 - -
Lja3g4274 623 Pfam Ethylene insensitive 3 28 263 IPR006957 GO:0005634
Lja3g4274 623 SUPERFAMILY DNA-binding domain of EIN3-like 143 266 IPR023278 GO:0003700|GO:0005634
Lja3g4274 623 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 563 - -
Lja3g4274 623 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 563 IPR006957 GO:0005634
Lja3g4274 623 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g4274 623 Gene3D - 140 273 IPR023278 GO:0003700|GO:0005634
Lja3g4274 623 Gene3D - 54 131 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4274 Lja-Chr3 82713289 82715508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4274 2 278 EIL Transcription Factor Family AT3G20770 54.671 3.14e-106 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lja3g4274 EIN3 5.4e-101 No_clan