Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4169 ATGGCTACTCTCATTGCTCCTGCCAAACACTCTCCTGTGGAGGATGCAGAAGCTCTCTGGAAGGCTTTTAAAGGTTGGGGAGCTGATTTTAAAGCCATTATAGCAATACTGGGTCACAGAAATGCTACCCAAAGGACAAAAACCAGACAAGCATACCATGACCTCTTCCAAGAGGATCTTATCAAACGCCTTGAGTCTGAGCTCTCAGGTGCCTTTGAGAGAGCAATGTACCGTTGGATATTGGAACCTACAGAGCGGGAGGCTTTATTGGCCAATCTAGCACTGAAAAATGCAAACAAAAACTACCAAGTGATTGTGGAAATTTCCTGTGTCCTTTCACCTGAAGAGCTTTTTGTTGTGAGGCGCGCCTATCACAACCGCTACAAACGGTCCTTGGAGGAAGATGTGGCTGCTAACACCTCTGGCCATCTTCGCCAGCTTTTGGTGGGATTGGTGAGCTCATTTAGGTATGGAGGCAGTGAGATCAATGCAAGATTGGCACAATCTGAAGCTGATATACTTCATGAGGCTATCAAAGACAAGAATCAGAATAATGAAGAAATTATTAGGATTCTTACCACAAGGAGCAAGATCCAGCTTGTGGCAACTTTCAACCGCTACAGGGATGACCATGGAATTGCCATCACTAAAAAATTGTCAGATGAAGGATCTAATGATTTTCATAAGGCAGCGCAAATAGCCATTAGTTGCATCAATGATCATAAGAAGTACTATGAAAAGGTTCTTCGCAATGCGATGGAAATTGATGGAACAGATGAAGAGGCAGTGACCCGTGTGATTGTCACAAGGGCAGAGAAGGATTTGAAGGACATTAAAGAGGTTTATTTCAAGAGAAACAGTGTTCAGCTTGAGCATGCTGTGGCCAAGGAAACTTCAGGAGACTACAAGAAATTCCTCCTTGCTCTCATGGGGAAAGATGATTAA 945 0.437 MATLIAPAKHSPVEDAEALWKAFKGWGADFKAIIAILGHRNATQRTKTRQAYHDLFQEDLIKRLESELSGAFERAMYRWILEPTEREALLANLALKNANKNYQVIVEISCVLSPEELFVVRRAYHNRYKRSLEEDVAANTSGHLRQLLVGLVSSFRYGGSEINARLAQSEADILHEAIKDKNQNNEEIIRILTTRSKIQLVATFNRYRDDHGIAITKKLSDEGSNDFHKAAQIAISCINDHKKYYEKVLRNAMEIDGTDEEAVTRVIVTRAEKDLKDIKEVYFKRNSVQLEHAVAKETSGDYKKFLLALMGKDD* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4169 314 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 PANTHER ANNEXIN 6 313 - -
Lja3g4169 314 PANTHER ANNEXIN 6 313 - -
Lja3g4169 314 SMART annex3 182 234 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 SMART annex3 257 309 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 ProSitePatterns Annexin repeat signature. 257 309 IPR018252 GO:0005509|GO:0005544
Lja3g4169 314 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
Lja3g4169 314 PRINTS Annexin family signature 297 310 IPR001464 GO:0005509|GO:0005544
Lja3g4169 314 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Lja3g4169 314 PRINTS Annexin family signature 173 199 IPR001464 GO:0005509|GO:0005544
Lja3g4169 314 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Lja3g4169 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Lja3g4169 314 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Lja3g4169 314 SUPERFAMILY Annexin 3 313 IPR037104 GO:0005509|GO:0005544
Lja3g4169 314 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 Gene3D Annexin 2 81 IPR037104 GO:0005509|GO:0005544
Lja3g4169 314 PRINTS Plant annexin signature 225 243 IPR009118 -
Lja3g4169 314 PRINTS Plant annexin signature 160 180 IPR009118 -
Lja3g4169 314 PRINTS Plant annexin signature 118 132 IPR009118 -
Lja3g4169 314 ProSiteProfiles Annexin repeat profile. 240 311 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 Gene3D Annexin 165 239 IPR037104 GO:0005509|GO:0005544
Lja3g4169 314 Pfam Annexin 90 151 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 Pfam Annexin 170 230 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 Pfam Annexin 247 309 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 ProSiteProfiles Annexin repeat profile. 165 236 IPR018502 GO:0005509|GO:0005544
Lja3g4169 314 Gene3D Annexin 242 312 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4169 Lja-Chr3 81388598 81392304 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4169 3 81388598 81392304 Lja3g4169 3 81388598 81392304 ECH
Lja3g4169 3 81388598 81392304 Lja3g4660 3 88665478 88667742 PCT