Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3976 ATGGCTTTTCTTCTACCCACCATCCGAATCCAACCTTCTCTCCTAGCCCAATGCCAATCCAAATCCGAAGACAAACCCCTTCCTCAAACTTTTTCACCATTAAATTTAAAAACCACTTATCAGTTTCCTATATCTTCCACCTTCTCTTCTTCCCTACCCACCCTCCAAACTCCACCAGGTGTTCAAGATAAGCAGCAACACCAGCAGCCAAAGGATGAATTCTATGTCAACCTTGGCCTCGCCGTGAGGACCCTCCGTGAGGACCTACCTCTTATCTTCATCAAAGACCTCAATTACAACATTTACAGGGATGATATAACATTTCTGGACCCCTTGAACACATTCACTGGGATTGAAAAGTACAAATTGATCTCCTGGGCATTAAGGTTTCATGGCAAACTCTTGTTCCATGAGATAGCATTTGAGGTATACAGGGTGTGGCAACCTTCAGAGAATGTTATATTGATTAGATGGAACCTCAGGGGTGTGCCGCGTGTCCCTTGGGAGGCTAAAGGAGAATTTCAGGGTACTTCAAGGTATAAATTGGACAGAAATGGCAAAATTTATGAACACAAAGTTCATAACTTGGCATTCAATTTTCCACGGAATATCAAACAAGTTTCAGTTTTGGATTTGGTTACTGCATCATGCCTTGCAACTCCAAATCCTACATTTTTGTGGGGTCATTTGGATGTTAACACTTCTTCATGGATATCTTTATACCGGGCAGTTAGGGAAACATTGGATCAAGAAGGGAGTTTTCTACCACAAGATGTTCTACCTACATGTTCATAG 795 0.4201 MAFLLPTIRIQPSLLAQCQSKSEDKPLPQTFSPLNLKTTYQFPISSTFSSSLPTLQTPPGVQDKQQHQQPKDEFYVNLGLAVRTLREDLPLIFIKDLNYNIYRDDITFLDPLNTFTGIEKYKLISWALRFHGKLLFHEIAFEVYRVWQPSENVILIRWNLRGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVHNLAFNFPRNIKQVSVLDLVTASCLATPNPTFLWGHLDVNTSSWISLYRAVRETLDQEGSFLPQDVLPTCS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3976 264 PANTHER OSJNBA0070C17.17-LIKE PROTEIN 1 254 - -
Lja3g3976 264 PANTHER RIKEN CDNA 2310061I04 GENE 1 254 IPR018790 -
Lja3g3976 264 SUPERFAMILY NTF2-like 98 193 IPR032710 -
Lja3g3976 264 Pfam Uncharacterized conserved protein (DUF2358) 81 191 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3976 Lja-Chr3 78395540 78396891 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3976 3 78395540 78396891 Lja3g3976 3 78395540 78396891 ECH
Lja3g3976 3 78395540 78396891 Lja3g2643 3 36410673 36412221 PCT